RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 ZNF253O75346 499 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 TFPI2P48307 235 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 DCANP1Q8TF63 244 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 LINC00479Q96M42 142 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 RPH3ALQ9UNE2 315 aa17.51■□□□□ 0.39
CNN3-202ENST00000394202 PSG9Q00887 426 aa17.5■□□□□ 0.39
CNN3-202ENST00000394202 CD300EQ496F6 205 aaPredicted RBP17.5■□□□□ 0.39
CNN3-202ENST00000394202 TMEM61Q8N0U2 210 aa17.5■□□□□ 0.39
CNN3-202ENST00000394202 DYNLRB2Q8TF09 96 aa17.5■□□□□ 0.39
CNN3-202ENST00000394202 SAV1Q9H4B6 383 aaPredicted RBP17.5■□□□□ 0.39
CNN3-202ENST00000394202 RPS10P5Q9NQ39 176 aa17.5■□□□□ 0.39
CNN3-202ENST00000394202 EPDR1Q9UM22 224 aa17.5■□□□□ 0.39
CNN3-202ENST00000394202 SORL1Q92673 2214 aa17.5■□□□□ 0.39
CNN3-202ENST00000394202 TMEM250H0YL14 139 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 RPUSD4Q96CM3 377 aaKnown RBP17.49■□□□□ 0.39
CNN3-202ENST00000394202 C16orf92Q96LL3 132 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 C20orf173Q96LM9 149 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 BIN3Q9NQY0 253 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 IZUMO1RA6ND01 250 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 RHEBQ15382 184 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 FAM24BQ8N5W8 94 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 C5orf17Q8NAS9 161 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 AAMDCQ9H7C9 122 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 SIGLEC8Q9NYZ4 499 aa17.49■□□□□ 0.39
CNN3-202ENST00000394202 C7orf77A4D0Y5 90 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 SAP30O75446 220 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 MEOX2P50222 304 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 C11orf52Q96A22 123 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 F6UZH7 168 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 C2CD4CQ8TF44 421 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 SLC50A1Q9BRV3 221 aa17.48■□□□□ 0.39
CNN3-202ENST00000394202 PEX7O00628 323 aa17.47■□□□□ 0.39
CNN3-202ENST00000394202 RNF212Q495C1 297 aa17.47■□□□□ 0.39
CNN3-202ENST00000394202 SOHLH1Q5JUK2 328 aa17.47■□□□□ 0.39
CNN3-202ENST00000394202 SGK494Q96LW2 274 aa17.47■□□□□ 0.39
CNN3-202ENST00000394202 MDFIQ99750 246 aa17.47■□□□□ 0.39
CNN3-202ENST00000394202 PARLQ9H300 379 aa17.47■□□□□ 0.39
CNN3-202ENST00000394202 PRAC2D3DTV9 90 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 M0R036 132 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 TCRAP04437 139 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 ZNF674Q2M3X9 581 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 SHISA2Q6UWI4 295 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 LINC00518Q8N0U6 118 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 CMTM2Q8TAZ6 248 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 TRAV34A0A0B4J273 112 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 MT-ND4LP03901 98 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 DEFB1P60022 68 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 LCN12Q6JVE5 192 aa17.46■□□□□ 0.39
CNN3-202ENST00000394202 RBPMS2Q6ZRY4 209 aaKnown RBP17.46■□□□□ 0.39
CNN3-202ENST00000394202 HIST1H2BAQ96A08 127 aa17.45■□□□□ 0.38
CNN3-202ENST00000394202 PKD1L1Q8TDX9 2849 aa17.45■□□□□ 0.38
CNN3-202ENST00000394202 K7EQG2 157 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 NDUFS6O75380 124 aaKnown RBP17.44■□□□□ 0.38
CNN3-202ENST00000394202 RPL35P42766 123 aaKnown RBP17.44■□□□□ 0.38
CNN3-202ENST00000394202 RAB5BP61020 215 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 GOLT1AQ6ZVE7 132 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 ANK2Q01484 3957 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 TRBV20OR9-2A0A075B6H5 130 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 TRAV8-1A0A0A6YYK1 113 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 DIRC3C9JPN6 131 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 ISLRO14498 428 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 PSG3Q16557 428 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 ATG101Q9BSB4 218 aa17.44■□□□□ 0.38
CNN3-202ENST00000394202 IGKV2-40A0A087WW87 121 aaPredicted RBP17.42■□□□□ 0.38
CNN3-202ENST00000394202 IGKV2D-40P01614 121 aaPredicted RBP17.42■□□□□ 0.38
CNN3-202ENST00000394202 IGLV1-51P01701 117 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 AKR1C3P42330 323 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 SMIM7Q9BQ49 75 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 ZNF727A8MUV8 499 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 ZNF688P0C7X2 276 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 ASCL2Q99929 193 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 TCEAL7Q9BRU2 100 aa17.42■□□□□ 0.38
CNN3-202ENST00000394202 PGPEP1LA6NFU8 196 aa17.41■□□□□ 0.38
CNN3-202ENST00000394202 C1orf196B1AJZ1 125 aa17.41■□□□□ 0.38
CNN3-202ENST00000394202 IGLV2-11P01706 119 aa17.41■□□□□ 0.38
CNN3-202ENST00000394202 ZNF705DP0CH99 300 aaPredicted RBP17.4■□□□□ 0.38
CNN3-202ENST00000394202 ZNF705BP0CI00 300 aaPredicted RBP17.4■□□□□ 0.38
CNN3-202ENST00000394202 CSN1S1P47710 185 aa17.4■□□□□ 0.38
CNN3-202ENST00000394202 PAFAH1B2P68402 229 aa17.4■□□□□ 0.38
CNN3-202ENST00000394202 ZNF738Q8NE65 137 aa17.4■□□□□ 0.38
CNN3-202ENST00000394202 VGLL1Q99990 258 aa17.4■□□□□ 0.38
CNN3-202ENST00000394202 ZNF256Q9Y2P7 627 aaPredicted RBP17.4■□□□□ 0.38
CNN3-202ENST00000394202 KLF12Q9Y4X4 402 aa17.4■□□□□ 0.38
CNN3-202ENST00000394202 F6UB75 175 aa17.39■□□□□ 0.37
CNN3-202ENST00000394202 WFDC9Q8NEX5 89 aa17.39■□□□□ 0.37
CNN3-202ENST00000394202 AURKAIP1Q9NWT8 199 aaPredicted RBP17.39■□□□□ 0.37
CNN3-202ENST00000394202 CNN1P51911 297 aaKnown RBP17.39■□□□□ 0.37
CNN3-202ENST00000394202 ERCC8Q13216 396 aa17.39■□□□□ 0.37
CNN3-202ENST00000394202 PSMG4Q5JS54 123 aa17.39■□□□□ 0.37
CNN3-202ENST00000394202 CD33P20138 364 aa17.38■□□□□ 0.37
CNN3-202ENST00000394202 ID1P41134 155 aa17.38■□□□□ 0.37
CNN3-202ENST00000394202 MRPL53Q96EL3 112 aaKnown RBP17.38■□□□□ 0.37
CNN3-202ENST00000394202 CMYA5Q8N3K9 4069 aa17.38■□□□□ 0.37
CNN3-202ENST00000394202 TRAV25A0A0B4J276 109 aa17.37■□□□□ 0.37
CNN3-202ENST00000394202 TMEM183BQ1AE95 376 aa17.37■□□□□ 0.37
CNN3-202ENST00000394202 ZFP82Q8N141 532 aa17.37■□□□□ 0.37
CNN3-202ENST00000394202 SPAG8Q99932 426 aaPredicted RBP17.37■□□□□ 0.37
CNN3-202ENST00000394202 CLEC5AQ9NY25 188 aa17.37■□□□□ 0.37
CNN3-202ENST00000394202 RAB5AP20339 215 aa17.37■□□□□ 0.37
CNN3-202ENST00000394202 AKR1D1P51857 326 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms