RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 F8W735 103 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 NDUFA3O95167 84 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 CEACAM3P40198 252 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 OR11H6Q8NGC7 330 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 C21orf62Q9NYP8 219 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 SMKR1H3BMG3 65 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 RELQ04864 619 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 NPBQ8NG41 125 aa10.91□□□□□ -0.66
GAPVD1-205ENST00000394084 LOC105371242A0A075B767 164 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 SFTPCP11686 197 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 PRELID3AQ96N28 172 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 PPP1R14DQ9NXH3 145 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 SIGLEC8Q9NYZ4 499 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 TRAV30A0A087WSZ9 112 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 CBY1Q9Y3M2 126 aa10.9□□□□□ -0.66
GAPVD1-205ENST00000394084 CCL21O00585 134 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 TAX1BP3O14907 124 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 OR4C5Q8NGB2 326 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 TIMD4Q96H15 378 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 A0A096LNJ9 63 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 NPIPB5A8MRT5 1133 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 Q6AWC8 147 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 VGLL1Q99990 258 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 ATRXP46100 2492 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 A0A1B0GW15 77 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 EGR2P11161 476 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 ZNF80P51504 273 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 GATD1Q8NB37 220 aa10.89□□□□□ -0.67
GAPVD1-205ENST00000394084 PDE6HQ13956 83 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 ZNF562Q6V9R5 426 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 TWIST1Q15672 202 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 WFDC3Q8IUB2 231 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 PRR25Q96S07 402 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 MS4A6AQ9H2W1 248 aa10.88□□□□□ -0.67
GAPVD1-205ENST00000394084 IGHV2-70DA0A0C4DH43 119 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 PRTN3P24158 256 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 PSG9Q00887 426 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 ZNF493Q6ZR52 646 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 K7ENP7 123 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 RPL7P18124 248 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 NHLH1Q02575 133 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 VMO1Q7Z5L0 202 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 S100A7AQ86SG5 101 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 ORMDL3Q8N138 153 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 COL6A6A6NMZ7 2263 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 GPR183P32249 361 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 ANKRD39Q53RE8 183 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 SMAD5-AS1Q9Y6J3 95 aa10.87□□□□□ -0.67
GAPVD1-205ENST00000394084 SPTBN1Q01082 2364 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 CTSGP08311 255 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 TTC9CQ8N5M4 171 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 IGF2RP11717 2491 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 COX8AP10176 69 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 TMEM11P17152 192 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 CKS2P33552 79 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 CACNG7P62955 275 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 RHOGP84095 191 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 DEFB125Q8N687 156 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 MSRB1Q9NZV6 116 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 HRNRQ86YZ3 2850 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-205ENST00000394084 IGHV3-66A0A0C4DH42 116 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 NPYP01303 97 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 ORM1P02763 201 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 AKAP6Q13023 2319 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 ERCC8Q13216 396 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 C2orf91Q6ZV80 131 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 FER1L6-AS1Q8NA97 138 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 THYN1Q9P016 225 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 M0R1W7 72 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 SAPCD1Q5SSQ6 148 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 ASH1LQ9NR48 2969 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 UQCRFS1P47985 274 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 AMMECR1LQ6DCA0 310 aa10.85□□□□□ -0.67
GAPVD1-205ENST00000394084 IGHG4P01861 327 aa10.84□□□□□ -0.67
GAPVD1-205ENST00000394084 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
GAPVD1-205ENST00000394084 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
GAPVD1-205ENST00000394084 U3KQK5 164 aa10.84□□□□□ -0.67
GAPVD1-205ENST00000394084 IGHV7-81A0A0B4J1V7 117 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 GAS8-AS1O95177 125 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 PCP4P48539 62 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 NDUFS7O75251 213 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 TMEM190Q8WZ59 177 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 ZNF48Q96MX3 618 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 C18orf15Q96N68 181 aa10.83□□□□□ -0.68
GAPVD1-205ENST00000394084 HBDP02042 147 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms