RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 HSPG2P98160 4391 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 BCAP31P51572 246 aa12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 CAV2P51636 162 aa12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 VWC2Q2TAL6 325 aa12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 C12orf45Q8N5I9 185 aaPredicted RBP12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 C16orf74Q96GX8 76 aa12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 C2orf50Q96LR7 162 aa12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
PDLIM7-205ENST00000393551 LRP1BQ9NZR2 4599 aa12.77□□□□□ -0.36
PDLIM7-205ENST00000393551 IGSF23A1L1A6 192 aa12.77□□□□□ -0.37
PDLIM7-205ENST00000393551 C5orf51A6NDU8 294 aa12.77□□□□□ -0.37
PDLIM7-205ENST00000393551 CBY3A6NI87 242 aa12.77□□□□□ -0.37
PDLIM7-205ENST00000393551 F5H768 121 aa12.77□□□□□ -0.37
PDLIM7-205ENST00000393551 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.37
PDLIM7-205ENST00000393551 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.37
PDLIM7-205ENST00000393551 ATP5G1P05496 136 aa12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 CT45A10P0DMU9 189 aa12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 ATP5G3P48201 142 aa12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 TMEM263Q8WUH6 116 aaKnown RBP12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 UQCC1Q9NVA1 299 aa12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 ZNF586Q9NXT0 402 aa12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
PDLIM7-205ENST00000393551 H7BYZ3 331 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 H2AFB2P0C5Z0 115 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 RAB32Q13637 225 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 ZNF493Q6ZR52 646 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 Q6ZRG5 221 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 TMEM252Q8N6L7 170 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 LINC00612Q8N6U2 182 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 ZNRF2Q8NHG8 242 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
PDLIM7-205ENST00000393551 UBE2L5PA0A1B0GUS4 154 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 FAM240BA0A1B0GVZ2 78 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 NUDT3O95989 172 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 MED14OSP0DP75 135 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 RPL29P47914 159 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 SULT1A1P50225 295 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 FAM3BP58499 235 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 C1orf134Q5TEV5 83 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 OR10J6PQ8NGY7 276 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 RNF141Q8WVD5 230 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 SLC39A9Q9NUM3 307 aa12.74□□□□□ -0.37
PDLIM7-205ENST00000393551 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
PDLIM7-205ENST00000393551 S100A10P60903 97 aa12.73□□□□□ -0.37
PDLIM7-205ENST00000393551 RAB31Q13636 194 aa12.73□□□□□ -0.37
PDLIM7-205ENST00000393551 Q6ZNX1 250 aa12.73□□□□□ -0.37
PDLIM7-205ENST00000393551 CHAC2Q8WUX2 184 aa12.73□□□□□ -0.37
PDLIM7-205ENST00000393551 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
PDLIM7-205ENST00000393551 J3KRW8 73 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 M0R3E3 92 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 NDUFB4O95168 129 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 S100A11P31949 105 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 BAXQ07812 192 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 GUK1Q16774 197 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 GCSAMLQ5JQS6 135 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 OR1L4Q8NGR5 311 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 ATG101Q9BSB4 218 aa12.72□□□□□ -0.37
PDLIM7-205ENST00000393551 ABCA13Q86UQ4 5058 aa12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 PVALBP20472 110 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 HOXA5P20719 270 aa12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 ZNF575Q86XF7 245 aa12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 ODF3Q96PU9 254 aa12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 PFDN5Q99471 154 aa12.71□□□□□ -0.37
PDLIM7-205ENST00000393551 TRBV19A0A075B6N1 114 aa12.7□□□□□ -0.38
PDLIM7-205ENST00000393551 NBDYA0A0U1RRE5 68 aa12.7□□□□□ -0.38
PDLIM7-205ENST00000393551 ZNF253O75346 499 aa12.7□□□□□ -0.38
PDLIM7-205ENST00000393551 FGF7P21781 194 aa12.7□□□□□ -0.38
PDLIM7-205ENST00000393551 PYYP10082 97 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 NHLH2Q02577 135 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 TNP2Q05952 138 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 ERCC8Q13216 396 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 STX12Q86Y82 276 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 MARVELD1Q9BSK0 173 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 TMEM14CQ9P0S9 112 aa12.69□□□□□ -0.38
PDLIM7-205ENST00000393551 APOBP04114 4563 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 GAGE12BA1L429 117 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 GAGE7O76087 117 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 GAGE12FP0CL80 117 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 GAGE12GP0CL81 117 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 GAGE12IP0CL82 117 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 LEPP41159 167 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 CCL18P55774 89 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 HBG1P69891 147 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 HBG2P69892 147 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 OR5I1Q13606 314 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 MRPL53Q96EL3 112 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 GPN1Q9HCN4 374 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-205ENST00000393551 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 SIX6O95475 246 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 HIST1H1EP10412 219 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 CD300CQ08708 224 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 ATP6V1FQ16864 119 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms