RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 AMBPP02760 352 aa13.81□□□□□ -0.2
PDLIM7-204ENST00000393546 ZNF345Q14585 488 aa13.81□□□□□ -0.2
PDLIM7-204ENST00000393546 AMTNQ6UX39 209 aa13.81□□□□□ -0.2
PDLIM7-204ENST00000393546 KCNRGQ8N5I3 272 aa13.81□□□□□ -0.2
PDLIM7-204ENST00000393546 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
PDLIM7-204ENST00000393546 A0A0D9SG52 128 aa13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 PRAC2D3DTV9 90 aa13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 PRB4P10163 310 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 UBE2L3P68036 154 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 ZNF503Q96F45 646 aa13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 ST6GAL2Q96JF0 529 aa13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 ARPC5LQ9BPX5 153 aa13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 CYTL1Q9NRR1 136 aa13.8□□□□□ -0.2
PDLIM7-204ENST00000393546 MIFP14174 115 aa13.79□□□□□ -0.2
PDLIM7-204ENST00000393546 CDC34P49427 236 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-204ENST00000393546 PQLC2Q6ZP29 291 aa13.79□□□□□ -0.2
PDLIM7-204ENST00000393546 EXOC3-AS1Q8N2X6 119 aa13.79□□□□□ -0.2
PDLIM7-204ENST00000393546 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-204ENST00000393546 M0R3E3 92 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 ICAM4Q14773 271 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 SPINK13Q1W4C9 94 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 LYPD1Q8N2G4 141 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 IGF2BP2-AS1Q96M15 143 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 ACTR3CQ9C0K3 210 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 X6R8D5 127 aa13.78□□□□□ -0.2
PDLIM7-204ENST00000393546 hCG_2014768A0A024R1R8 64 aa13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 BOLA2-SMG1P6H3BVE0 249 aa13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 HMGB3O15347 200 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 RANP62826 216 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 TCTE3Q8IZS6 198 aa13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 RAB24Q969Q5 203 aa13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 PHYHIPLQ96FC7 376 aa13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 C11orf68Q9H3H3 251 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-204ENST00000393546 IGHV3OR16-12A0A075B7B8 117 aa13.76□□□□□ -0.21
PDLIM7-204ENST00000393546 IGHV4-28A0A0C4DH34 117 aa13.76□□□□□ -0.21
PDLIM7-204ENST00000393546 KANTRA0A1W2PQU2 76 aa13.76□□□□□ -0.21
PDLIM7-204ENST00000393546 M0R2Z0 102 aa13.76□□□□□ -0.21
PDLIM7-204ENST00000393546 Q8NAQ8 132 aa13.76□□□□□ -0.21
PDLIM7-204ENST00000393546 NEU1Q99519 415 aa13.76□□□□□ -0.21
PDLIM7-204ENST00000393546 SMIM9A6NGZ8 99 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 DEFB4AO15263 64 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 STAG3L2P0CL84 134 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 STAG3L3P0CL85 134 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 TSPOP30536 169 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 CSN1S1P47710 185 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 AKR1C8PQ5T2L2 129 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 ZFAND6Q6FIF0 208 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 C1orf158Q8N1D5 194 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 Q9H3A6 140 aa13.75□□□□□ -0.21
PDLIM7-204ENST00000393546 NPIPB6E9PJ23 425 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 BCL2L11O43521 198 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 INSP01308 110 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 RBMY1A1P0DJD3 496 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 RBMY1CP0DJD4 496 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 ARL14EPLP0DKL9 152 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 CDKN1BP46527 198 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 RBMY1FQ15415 496 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 CASC10Q5T4H9 136 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 TMUB2Q71RG4 321 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 LINC00477Q96M19 166 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 ZNF471Q9BX82 626 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-204ENST00000393546 TRAV12-2A0A075B6T6 113 aa13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 CRXO43186 299 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 PFDN1O60925 122 aa13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 CT45A10P0DMU9 189 aa13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 EIF5AP63241 154 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 FAM74A1Q5RGS3 127 aa13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 AKAP14Q86UN6 197 aa13.73□□□□□ -0.21
PDLIM7-204ENST00000393546 PGPA6NDG6 321 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 CXorf1O96002 111 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 LEPP41159 167 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 ERCC8Q13216 396 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 BAP18Q8IXM2 172 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 C11orf45Q8TAV5 145 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 RXFP4Q8TDU9 374 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 ODF3Q96PU9 254 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 OTORQ9NRC9 128 aa13.72□□□□□ -0.21
PDLIM7-204ENST00000393546 CTXND1A0A1B0GTU2 59 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 HBE1P02100 147 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 C1QBP02746 253 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 GCHFRP30047 84 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 C9orf47Q6ZRZ4 202 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 AGPAT4-IT1Q9H0P7 198 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
PDLIM7-204ENST00000393546 IGKV2-40A0A087WW87 121 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 TMEM189A5PLL7 270 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 IGKV2D-40P01614 121 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 SEC11BP0C7V7 166 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 TMEM78Q5T7P6 136 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 CMTM2Q8TAZ6 248 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 SUN5Q8TC36 379 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 HYLS1Q96M11 299 aa13.7□□□□□ -0.22
PDLIM7-204ENST00000393546 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
PDLIM7-204ENST00000393546 PMS2P11Q13670 270 aa13.69□□□□□ -0.22
PDLIM7-204ENST00000393546 RRN3P1Q2M238 152 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms