RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 C11orf52Q96A22 123 aa9.78□□□□□ -0.84
USP44-202ENST00000393091 AMBPP02760 352 aa9.78□□□□□ -0.84
USP44-202ENST00000393091 FAM74A1Q5RGS3 127 aa9.78□□□□□ -0.84
USP44-202ENST00000393091 ALKAL2Q6UX46 152 aa9.78□□□□□ -0.84
USP44-202ENST00000393091 MED9Q9NWA0 146 aa9.78□□□□□ -0.84
USP44-202ENST00000393091 DIRC3C9JPN6 131 aa9.77□□□□□ -0.84
USP44-202ENST00000393091 PRR25Q96S07 402 aa9.77□□□□□ -0.84
USP44-202ENST00000393091 SMDT1Q9H4I9 107 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
USP44-202ENST00000393091 ZNF705EA8MWA4 302 aaPredicted RBP9.77□□□□□ -0.85
USP44-202ENST00000393091 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 CRISP2P16562 243 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 DEFB131AP59861 70 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 RPL11P62913 178 aaKnown RBP9.77□□□□□ -0.85
USP44-202ENST00000393091 GBGT1Q8N5D6 347 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 TMEM75Q8N9X5 138 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 OR8A1Q8NGG7 326 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 HIST1H2BAQ96A08 127 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 LINC00467Q9BRT7 94 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.85
USP44-202ENST00000393091 RBMY1BA6NDE4 496 aaKnown RBP9.76□□□□□ -0.85
USP44-202ENST00000393091 RBMY1EA6NEQ0 496 aaKnown RBP9.76□□□□□ -0.85
USP44-202ENST00000393091 S100A9P06702 114 aaKnown RBP9.76□□□□□ -0.85
USP44-202ENST00000393091 OR10J4P0C629 311 aa9.76□□□□□ -0.85
USP44-202ENST00000393091 RBMY1DP0C7P1 496 aaKnown RBP9.76□□□□□ -0.85
USP44-202ENST00000393091 IGHV4-30-4P0DP06 118 aa9.76□□□□□ -0.85
USP44-202ENST00000393091 PSMG4Q5JS54 123 aa9.76□□□□□ -0.85
USP44-202ENST00000393091 C20orf144Q9BQM9 153 aa9.76□□□□□ -0.85
USP44-202ENST00000393091 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
USP44-202ENST00000393091 RPUSD4Q96CM3 377 aaKnown RBP9.76□□□□□ -0.85
USP44-202ENST00000393091 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 ZNF506Q5JVG8 444 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 SRD5A3Q9H8P0 318 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 EPDR1Q9UM22 224 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 CCL20P78556 96 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 RNF182Q8N6D2 247 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 ATG101Q9BSB4 218 aa9.75□□□□□ -0.85
USP44-202ENST00000393091 LOC102724200A0A096LPH7 203 aaPredicted RBP9.74□□□□□ -0.85
USP44-202ENST00000393091 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 IFNA1P01562 189 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 IGLV2-11P01706 119 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 GIG44P09565 113 aaPredicted RBP9.74□□□□□ -0.85
USP44-202ENST00000393091 ICAM4Q14773 271 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 CSNK1G2-AS1Q8NCQ2 148 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 SMIM12Q96EX1 92 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 B9D2Q9BPU9 175 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 TMPRSS5Q9H3S3 457 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 TCRAP04437 139 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 EBLN2Q6P2I7 272 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 EXOC3-AS1Q8N2X6 119 aa9.74□□□□□ -0.85
USP44-202ENST00000393091 BCL2P10415 239 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 APOC4P55056 127 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
USP44-202ENST00000393091 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 ZNF492Q9P255 531 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 PGPA6NDG6 321 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 F6UZH7 168 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 PDE6DO43924 150 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 HLA-DMBP28068 263 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 Q6ZWC4 215 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 ZNF738Q8NE65 137 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 VAX2Q9UIW0 290 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 KLLNB2CW77 178 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 CSN1S1P47710 185 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
USP44-202ENST00000393091 GDF5OSQ5U4N7 250 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 C2CD4CQ8TF44 421 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 FAM210AQ96ND0 272 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 NEU1Q99519 415 aa9.73□□□□□ -0.85
USP44-202ENST00000393091 PRAC2D3DTV9 90 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
USP44-202ENST00000393091 TFPI2P48307 235 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 OR10J6PQ8NGY7 276 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 TP53TG3Q9ULZ0 132 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 LEPP41159 167 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 FMC1Q96HJ9 113 aa9.72□□□□□ -0.85
USP44-202ENST00000393091 CT45A10P0DMU9 189 aa9.71□□□□□ -0.85
USP44-202ENST00000393091 STHQ8IWL8 128 aa9.71□□□□□ -0.85
USP44-202ENST00000393091 NHLRC4P0CG21 123 aaPredicted RBP9.71□□□□□ -0.86
USP44-202ENST00000393091 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
USP44-202ENST00000393091 TMEM183BQ1AE95 376 aa9.71□□□□□ -0.86
USP44-202ENST00000393091 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
USP44-202ENST00000393091 C1QTNF4Q9BXJ3 329 aa9.71□□□□□ -0.86
USP44-202ENST00000393091 ZNF705FA8MVS1 300 aaPredicted RBP9.71□□□□□ -0.86
USP44-202ENST00000393091 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
USP44-202ENST00000393091 PEX7O00628 323 aa9.71□□□□□ -0.86
USP44-202ENST00000393091 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
USP44-202ENST00000393091 AGPAT4-IT1Q9H0P7 198 aa9.71□□□□□ -0.86
USP44-202ENST00000393091 PAGE4O60829 102 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 FRMD6-AS1P0C7T7 363 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 ZNF138P52744 262 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 EIF4E3Q8N5X7 224 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms