RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 HCFC1P51610 2035 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 TRGV11A0A075B6L2 103 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 SYNGR3O43761 229 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 AGFG2O95081 481 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
VTI1A-201ENST00000393077 COX6A1P12074 109 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 PRR30Q53SZ7 412 aaPredicted RBP6.14□□□□□ -1.43
VTI1A-201ENST00000393077 Q6Q795 121 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 NFE4Q86UQ8 179 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 IGF2BP2-AS1Q96M15 143 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 HES7Q9BYE0 225 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 ZNF492Q9P255 531 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 TECTAO75443 2155 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 A0A1B0GXF2 115 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 TCF15Q12870 199 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 Q6ZS92 163 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 URB1-AS1Q96HZ7 61 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 DUX3Q96PT4 197 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 PRUNE2Q8WUY3 3088 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 PRR14LQ5THK1 2151 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 AKAP6Q13023 2319 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 SHISA9B4DS77 424 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 TCRAP04437 139 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 LYZL1Q6UWQ5 148 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 Q6ZQT7 251 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 NUP210LQ5VU65 1888 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 H7C1H1 209 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 IGLV2-8P01709 118 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 CECR9P0C854 216 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 FAM104BQ5XKR9 115 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 OTORQ9NRC9 128 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 IGKV2D-26A0A0A0MRZ7 120 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 M0R2P5 195 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 PLXNB1O43157 2135 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 WISP1O95388 367 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 TCL1BO95988 128 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 LINC00205P59089 165 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 FOXE3Q13461 319 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 Q8N1Y9 231 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 ZNF837Q96EG3 531 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-201ENST00000393077 HS3ST6Q96QI5 342 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 PKDREJQ9NTG1 2253 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 KMT2EQ8IZD2 1858 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 TIMM8AO60220 97 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-201ENST00000393077 UCNP55089 124 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 NUP37Q8NFH4 326 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 LINC00527Q9UJ94 153 aa6.13□□□□□ -1.43
VTI1A-201ENST00000393077 TRBV6-6A0A0A6YYG2 114 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 MRPL14Q6P1L8 145 aaKnown RBP6.12□□□□□ -1.43
VTI1A-201ENST00000393077 NFAM1Q8NET5 270 aaPredicted RBP6.12□□□□□ -1.43
VTI1A-201ENST00000393077 IGHV3-21A0A0B4J1V1 117 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 TMEM213A2RRL7 107 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 RPL39P5Q59GN2 51 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 SPANXN1Q5VSR9 72 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 FAM214BQ7L5A3 538 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 TRGV9Q99603 122 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 SIGLEC9Q9Y336 463 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 IGLV3-12A0A075B6K2 115 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV3A0A0B4J244 114 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV17A0A0B4J275 112 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 C15orf61A6NNL5 157 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 RFPL3SP0C7P2 107 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 S100A4P26447 101 aaKnown RBP6.12□□□□□ -1.43
VTI1A-201ENST00000393077 PRDX2P32119 198 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 LOXL1Q08397 574 aaPredicted RBP6.12□□□□□ -1.43
VTI1A-201ENST00000393077 ZNF497Q6ZNH5 498 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 MBD6Q96DN6 1003 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 ZNF714Q96N38 554 aa6.12□□□□□ -1.43
VTI1A-201ENST00000393077 COL4A3Q01955 1670 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 LINC00473A8K010 186 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 SLC25A16P16260 332 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 CRYGSP22914 178 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 PRR20EP86478 221 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 PRR20CP86479 221 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 PRR20DP86480 221 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 PRR20BP86481 221 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 PRR20AP86496 221 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 CD69Q07108 199 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 MRPL51Q4U2R6 128 aaKnown RBP6.11□□□□□ -1.43
VTI1A-201ENST00000393077 AJUBAQ96IF1 538 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 SCNM1Q9BWG6 230 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 PRDM14Q9GZV8 571 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.11□□□□□ -1.43
VTI1A-201ENST00000393077 LYZL6O75951 148 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 SEC61GP60059 68 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 LAGE3Q14657 143 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 ZNF503Q96F45 646 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 CHCHD2Q9Y6H1 151 aaPredicted RBP6.11□□□□□ -1.43
VTI1A-201ENST00000393077 EML5Q05BV3 1969 aa6.11□□□□□ -1.43
VTI1A-201ENST00000393077 COL4A4P53420 1690 aaPredicted RBP6.11□□□□□ -1.43
VTI1A-201ENST00000393077 ZNF71Q9NQZ8 489 aaPredicted RBP6.11□□□□□ -1.43
VTI1A-201ENST00000393077 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 DUTP33316 252 aaKnown RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 FOXF2Q12947 444 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 IMMP1LQ96LU5 166 aa6.1□□□□□ -1.43
VTI1A-201ENST00000393077 MRPL20Q9BYC9 149 aaKnown RBP6.1□□□□□ -1.43
VTI1A-201ENST00000393077 CHD9Q3L8U1 2897 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms