RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RPLP1P05386 114 aaKnown RBP16.33■□□□□ 0.21
SPHK1-202ENST00000392496 FRZBQ92765 325 aa16.33■□□□□ 0.21
SPHK1-202ENST00000392496 ACANP16112 2415 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 C19orf71A6NCJ1 209 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BKO60814 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BJP06899 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BOP23527 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BBP33778 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BDP58876 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 SNRPEP62304 92 aaKnown RBP16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BCP62807 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 RPL19P84098 196 aaKnown RBP16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST2H2BEQ16778 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 FAM106AQ4KMX7 169 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.33■□□□□ 0.2
SPHK1-202ENST00000392496 GPHB5Q86YW7 130 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BHQ93079 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BNQ99877 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 HIST1H2BMQ99879 126 aa16.33■□□□□ 0.2
SPHK1-202ENST00000392496 MXRA5Q9NR99 2828 aa16.32■□□□□ 0.2
SPHK1-202ENST00000392496 K7EMT4 169 aa16.32■□□□□ 0.2
SPHK1-202ENST00000392496 TRGC1P0CF51 173 aa16.32■□□□□ 0.2
SPHK1-202ENST00000392496 ACTL10Q5JWF8 245 aa16.32■□□□□ 0.2
SPHK1-202ENST00000392496 LCN12Q6JVE5 192 aa16.32■□□□□ 0.2
SPHK1-202ENST00000392496 MAST4O15021 2626 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 HLA-DMBP28068 263 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 CT83Q5H943 113 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 LINC00322Q6ZN03 302 aaPredicted RBP16.31■□□□□ 0.2
SPHK1-202ENST00000392496 CLEC5AQ9NY25 188 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 LGALS1P09382 135 aaKnown RBP16.31■□□□□ 0.2
SPHK1-202ENST00000392496 IGFL4Q6B9Z1 124 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 C8orf86Q6ZUL3 223 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 MRPL53Q96EL3 112 aaKnown RBP16.31■□□□□ 0.2
SPHK1-202ENST00000392496 DAZAP1Q96EP5 407 aaKnown RBP16.31■□□□□ 0.2
SPHK1-202ENST00000392496 UBE2E2Q96LR5 201 aa16.31■□□□□ 0.2
SPHK1-202ENST00000392496 DAZ1Q9NQZ3 744 aaKnown RBP16.31■□□□□ 0.2
SPHK1-202ENST00000392496 IGKV2-40A0A087WW87 121 aaPredicted RBP16.3■□□□□ 0.2
SPHK1-202ENST00000392496 IGHV7-4-1A0A0J9YVY3 117 aa16.3■□□□□ 0.2
SPHK1-202ENST00000392496 DNAJC9-AS1A6NH13 148 aa16.3■□□□□ 0.2
SPHK1-202ENST00000392496 IGKV2D-40P01614 121 aaPredicted RBP16.3■□□□□ 0.2
SPHK1-202ENST00000392496 P01737 135 aa16.3■□□□□ 0.2
SPHK1-202ENST00000392496 GBGT1Q8N5D6 347 aa16.3■□□□□ 0.2
SPHK1-202ENST00000392496 TSKUQ8WUA8 353 aa16.3■□□□□ 0.2
SPHK1-202ENST00000392496 RPP21Q9H633 154 aaKnown RBP16.3■□□□□ 0.2
SPHK1-202ENST00000392496 CA1P00915 261 aaPredicted RBP16.29■□□□□ 0.2
SPHK1-202ENST00000392496 TRAV8-2A0A0B4J237 113 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 RBAKDNA6NC62 111 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 IZUMO1RA6ND01 250 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 NPIPB6E9PJ23 425 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 UBE2CO00762 179 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 LY6G6DO95868 133 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 TCL1AP56279 114 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 SCGB2A2Q13296 93 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 OR4B1Q8NGF8 309 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 ZC2HC1AQ96GY0 325 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 TMEM160Q9NX00 188 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 TRAPPC1Q9Y5R8 145 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 ZNF705FA8MVS1 300 aaPredicted RBP16.28■□□□□ 0.2
SPHK1-202ENST00000392496 FABP9Q0Z7S8 132 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 COX19Q49B96 90 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 TM4SF20Q53R12 229 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 SAPCD1Q5SSQ6 148 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 COX8CQ7Z4L0 72 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 UFC1Q9Y3C8 167 aa16.28■□□□□ 0.2
SPHK1-202ENST00000392496 TLN2Q9Y4G6 2542 aa16.27■□□□□ 0.2
SPHK1-202ENST00000392496 PRB4P10163 310 aaPredicted RBP16.27■□□□□ 0.2
SPHK1-202ENST00000392496 Q71RC1 249 aaPredicted RBP16.27■□□□□ 0.2
SPHK1-202ENST00000392496 NAT8BQ9UHF3 227 aa16.27■□□□□ 0.2
SPHK1-202ENST00000392496 SMPXQ9UHP9 88 aa16.27■□□□□ 0.2
SPHK1-202ENST00000392496 FAM181BA6NEQ2 426 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 A8MWL6 223 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 NDUFA6P56556 154 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 RNF182Q8N6D2 247 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 RHPN1-AS1Q9BWJ2 59 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 HIVEP2P31629 2446 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 Q6ZSV7 163 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 KLHDC1Q8N7A1 406 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 C16orf92Q96LL3 132 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 PRR25Q96S07 402 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 SMR3AQ99954 134 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 VGLL1Q99990 258 aa16.26■□□□□ 0.19
SPHK1-202ENST00000392496 HIVEP1P15822 2718 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 CT45A10P0DMU9 189 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 NUP35Q8NFH5 326 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 C8orf49Q96NF6 230 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 NEU1Q99519 415 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 GNB1LQ9BYB4 327 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 GFRA4Q9GZZ7 299 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 ESM1Q9NQ30 184 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 F8P00451 2351 aa16.25■□□□□ 0.19
SPHK1-202ENST00000392496 FAM231BA6NCW3 169 aa16.24■□□□□ 0.19
SPHK1-202ENST00000392496 PRAC2D3DTV9 90 aa16.24■□□□□ 0.19
SPHK1-202ENST00000392496 HOXA5P20719 270 aa16.24■□□□□ 0.19
SPHK1-202ENST00000392496 WDR73Q6P4I2 378 aa16.24■□□□□ 0.19
SPHK1-202ENST00000392496 REC114Q7Z4M0 266 aa16.24■□□□□ 0.19
SPHK1-202ENST00000392496 ASCL2Q99929 193 aa16.24■□□□□ 0.19
SPHK1-202ENST00000392496 BMI1P35226 326 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 CRIP1P50238 77 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 RASL11AQ6T310 242 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 HIGD1CA8MV81 97 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms