RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ATP5G3P48201 142 aa11.61□□□□□ -0.55
PTPRK-208ENST00000392449 CNPY1Q3B7I2 92 aa11.61□□□□□ -0.55
PTPRK-208ENST00000392449 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
PTPRK-208ENST00000392449 C12orf45Q8N5I9 185 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-208ENST00000392449 DNAJC4Q9NNZ3 241 aa11.61□□□□□ -0.55
PTPRK-208ENST00000392449 UQCC1Q9NVA1 299 aa11.61□□□□□ -0.55
PTPRK-208ENST00000392449 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
PTPRK-208ENST00000392449 TIMM8BQ9Y5J9 83 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-208ENST00000392449 CBY3A6NI87 242 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 RAB32Q13637 225 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 C1orf134Q5TEV5 83 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 OR10J6PQ8NGY7 276 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 TMEM263Q8WUH6 116 aaKnown RBP11.6□□□□□ -0.55
PTPRK-208ENST00000392449 RNF141Q8WVD5 230 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 C2orf50Q96LR7 162 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 ZNF586Q9NXT0 402 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 RNF24Q9Y225 148 aa11.6□□□□□ -0.55
PTPRK-208ENST00000392449 H7BYZ3 331 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 H2AFB2P0C5Z0 115 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 BAXQ07812 192 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 Q6ZRG5 221 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 ZNRF2Q8NHG8 242 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 PXMP4Q9Y6I8 212 aa11.59□□□□□ -0.55
PTPRK-208ENST00000392449 MED14OSP0DP75 135 aa11.58□□□□□ -0.56
PTPRK-208ENST00000392449 RAB31Q13636 194 aa11.58□□□□□ -0.56
PTPRK-208ENST00000392449 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-208ENST00000392449 SLC39A9Q9NUM3 307 aa11.58□□□□□ -0.56
PTPRK-208ENST00000392449 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.56
PTPRK-208ENST00000392449 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 M0R3E3 92 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 SULT1A1P50225 295 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 IL15RAQ13261 267 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 GCSAMLQ5JQS6 135 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 ZNF493Q6ZR52 646 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 TMEM252Q8N6L7 170 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 GAGE12BA1L429 117 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 GAGE7O76087 117 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 GAGE12FP0CL80 117 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 GAGE12GP0CL81 117 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 GAGE12IP0CL82 117 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 PVALBP20472 110 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-208ENST00000392449 FGF7P21781 194 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 TNP2Q05952 138 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 ERCC8Q13216 396 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 OR5I1Q13606 314 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
PTPRK-208ENST00000392449 A0A0J9YY99 117 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 NBDYA0A0U1RRE5 68 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 FAM240BA0A1B0GVZ2 78 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 NPIPB6E9PJ23 425 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 PYYP10082 97 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 HOXA5P20719 270 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 RPL29P47914 159 aaKnown RBP11.56□□□□□ -0.56
PTPRK-208ENST00000392449 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-208ENST00000392449 PFDN5Q99471 154 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 CCDC32Q9BV29 185 aa11.56□□□□□ -0.56
PTPRK-208ENST00000392449 MUC4Q99102 2169 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 RYR1P21817 5038 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 TRBV19A0A075B6N1 114 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 TRAV26-1A0A087WT03 109 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 NDUFB4O95168 129 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 SIX6O95475 246 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 S100A11P31949 105 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 SSX7Q7RTT5 188 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 STX12Q86Y82 276 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
PTPRK-208ENST00000392449 GPN1Q9HCN4 374 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-208ENST00000392449 LEPP41159 167 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 CCL18P55774 89 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 CLINT1Q14677 625 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 GUK1Q16774 197 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 THAP6Q8TBB0 222 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 BLNKQ8WV28 456 aa11.54□□□□□ -0.56
PTPRK-208ENST00000392449 J3QL48 77 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 RLN2P04090 185 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 HBG1P69891 147 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 HBG2P69892 147 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 NHLH2Q02577 135 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 Q6ZTI0 123 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 GNPNAT1Q96EK6 184 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-208ENST00000392449 TMPRSS5Q9H3S3 457 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 NDUFA13Q9P0J0 144 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 ABCA13Q86UQ4 5058 aa11.53□□□□□ -0.56
PTPRK-208ENST00000392449 SNURFLB1AK76 121 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 CD300CQ08708 224 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 BTN1A1Q13410 526 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 C6orf223Q8N319 242 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 ODF3Q96PU9 254 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 NPCDR1Q9BY65 106 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.56
PTPRK-208ENST00000392449 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-208ENST00000392449 ZNF253O75346 499 aa11.51□□□□□ -0.57
PTPRK-208ENST00000392449 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-208ENST00000392449 M6PRP20645 277 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms