RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ATG2AQ2TAZ0 1938 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 C7orf71A4D174 169 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 TMEM249Q2WGJ8 235 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 TRAV12-3A0A0B4J271 114 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 LYZL1Q6UWQ5 148 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 NUP35Q8NFH5 326 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 IGHV7-81A0A0B4J1V7 117 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 AMMECR1LQ6DCA0 310 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNX9-201ENST00000392185 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 ZNF491Q8N8L2 437 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 C17orf77Q96MU5 243 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 HERVK_113P61574 105 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 C1orf229Q6ZS94 237 aaPredicted RBP13.05□□□□□ -0.32
SNX9-201ENST00000392185 LSM4Q9Y4Z0 139 aaKnown RBP13.05□□□□□ -0.32
SNX9-201ENST00000392185 SH2D1AO60880 128 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 NRN1Q9NPD7 142 aa13.05□□□□□ -0.32
SNX9-201ENST00000392185 KLF2Q9Y5W3 355 aaPredicted RBP13.05□□□□□ -0.32
SNX9-201ENST00000392185 WDFY4Q6ZS81 3184 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
SNX9-201ENST00000392185 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 SAMD13Q5VXD3 122 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 Q86TA4 180 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 TMEM70Q9BUB7 260 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 PAX1P15863 534 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 PMCHL1Q16048 86 aa13.04□□□□□ -0.32
SNX9-201ENST00000392185 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
SNX9-201ENST00000392185 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
SNX9-201ENST00000392185 GNB1LQ9BYB4 327 aa13.03□□□□□ -0.32
SNX9-201ENST00000392185 MRPL36Q9P0J6 103 aaKnown RBP13.03□□□□□ -0.32
SNX9-201ENST00000392185 HCFC1P51610 2035 aa13.03□□□□□ -0.32
SNX9-201ENST00000392185 IGKV1-17P01599 117 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 HTN3P15516 51 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 ST6GALNAC6Q969X2 333 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 TRGV2A0A075B6R0 118 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 SNAI2O43623 268 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 HLA-DMBP28068 263 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 DEFB131AP59861 70 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 C14orf144Q96I85 54 aa13.02□□□□□ -0.32
SNX9-201ENST00000392185 IGKV1OR2-108A0A075B7D4 117 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 THAP8Q8NA92 274 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 TMEM160Q9NX00 188 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 ZNF25P17030 456 aaPredicted RBP13.02□□□□□ -0.33
SNX9-201ENST00000392185 LMO4P61968 165 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 Q8N9W7 124 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 ZNF414Q96IQ9 312 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 TNFRSF18Q9Y5U5 241 aa13.02□□□□□ -0.33
SNX9-201ENST00000392185 J3QLI3 93 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 K7EIM0 57 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 HINT1P49773 126 aaPredicted RBP13.01□□□□□ -0.33
SNX9-201ENST00000392185 FXYD5Q96DB9 178 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 UBE2E2Q96LR5 201 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 HIST1H2BLQ99880 126 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 A0A1B0GW15 77 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 SCGB1C2P0DMR2 95 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 PDE6HQ13956 83 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 LY96Q9Y6Y9 160 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 CENPEQ02224 2701 aa13.01□□□□□ -0.33
SNX9-201ENST00000392185 ZNF324O75467 553 aaPredicted RBP13.01□□□□□ -0.33
SNX9-201ENST00000392185 PFN1P07737 140 aaKnown RBP13.01□□□□□ -0.33
SNX9-201ENST00000392185 HIST2H2BCQ6DN03 193 aa13□□□□□ -0.33
SNX9-201ENST00000392185 A0A1B0GUS0 222 aa13□□□□□ -0.33
SNX9-201ENST00000392185 DDTP30046 118 aa13□□□□□ -0.33
SNX9-201ENST00000392185 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
SNX9-201ENST00000392185 C8orf49Q96NF6 230 aa13□□□□□ -0.33
SNX9-201ENST00000392185 IGLV2-23P01705 113 aa13□□□□□ -0.33
SNX9-201ENST00000392185 LINC00614P0C842 121 aa13□□□□□ -0.33
SNX9-201ENST00000392185 VWC2Q2TAL6 325 aa13□□□□□ -0.33
SNX9-201ENST00000392185 OR11H1Q8NG94 326 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 COL4A2P08572 1712 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 H3BRN7 92 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
SNX9-201ENST00000392185 C8orf86Q6ZUL3 223 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 NIT1Q86X76 327 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 C5orf52A6NGY3 159 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
SNX9-201ENST00000392185 D6R8Y8 96 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 AMBPP02760 352 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 LEPP41159 167 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 FOXC2Q99958 501 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 UBE2L6O14933 153 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 TCTEX1D4Q5JR98 221 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 PATE2Q6UY27 113 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 SCGB3A1Q96QR1 104 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 SPOCK3Q9BQ16 436 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 TRAV8-6A0A0B4J262 113 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 AMN1Q8IY45 258 aa12.98□□□□□ -0.33
SNX9-201ENST00000392185 F2Z2F3 143 aa12.97□□□□□ -0.33
SNX9-201ENST00000392185 SIRPDQ9H106 197 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms