RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
SMARCAL1-203ENST00000392128 ZNF331Q9NQX6 463 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-203ENST00000392128 ZNF207O43670 478 aaKnown RBP8.78□□□□□ -1
SMARCAL1-203ENST00000392128 TYMSP04818 313 aa8.78□□□□□ -1
SMARCAL1-203ENST00000392128 BMI1P35226 326 aa8.78□□□□□ -1
SMARCAL1-203ENST00000392128 ZFP82Q8N141 532 aa8.78□□□□□ -1
SMARCAL1-203ENST00000392128 TLN2Q9Y4G6 2542 aa8.77□□□□□ -1
SMARCAL1-203ENST00000392128 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGHV3-66A0A0C4DH42 116 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZNF785A8K8V0 405 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 M0R3E3 92 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 CSN1S1P47710 185 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 FAM3BP58499 235 aaPredicted RBP8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 SRD5A3Q9H8P0 318 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 SERTAD4Q9NUC0 356 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 TMEM160Q9NX00 188 aa8.77□□□□□ -1.01
SMARCAL1-203ENST00000392128 TRAV8-1A0A0A6YYK1 113 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 DNAJC9-AS1A6NH13 148 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 RPLP1P05386 114 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 PSG3Q16557 428 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 RPEL1Q2QD12 228 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 GLMPQ8WWB7 406 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGHV3OR16-13A0A075B7E8 117 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGHV3-49A0A0A0MS15 119 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGHV3-74A0A0B4J1X5 117 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 NUTF2P61970 127 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 SCGB2A2Q13296 93 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 GPHB5Q86YW7 130 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZFP30Q9Y2G7 519 aa8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 FASNP49327 2511 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-203ENST00000392128 A0A1W2PS18 150 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZNF320A2RRD8 509 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 C5orf52A6NGY3 159 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 LINC00614P0C842 121 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 PRNTQ86SH4 94 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 UBE2E2Q96LR5 201 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 FBLL1A6NHQ2 334 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZNF705GA8MUZ8 300 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 K7EMT4 169 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 TRGC2P03986 189 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 LGALS1P09382 135 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 FAM106AQ4KMX7 169 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 NUDT10Q8NFP7 164 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 NUDT11Q96G61 164 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 GRAMD2BQ96HH9 432 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 DAZ1Q9NQZ3 744 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 PSG8Q9UQ74 426 aa8.75□□□□□ -1.01
SMARCAL1-203ENST00000392128 HECTD1Q9ULT8 2610 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 CHEK1O14757 476 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGHV7-4-1A0A0J9YVY3 117 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 PHOX2AO14813 284 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 SONP18583 2426 aaKnown RBP8.74□□□□□ -1.01
SMARCAL1-203ENST00000392128 LCN12Q6JVE5 192 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 Q6ZSV7 163 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 MRPL53Q96EL3 112 aaKnown RBP8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 CLEC5AQ9NY25 188 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 TRAV8-2A0A0B4J237 113 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 LINC00322Q6ZN03 302 aaPredicted RBP8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 KLHDC1Q8N7A1 406 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 UFC1Q9Y3C8 167 aa8.73□□□□□ -1.01
SMARCAL1-203ENST00000392128 GAGE1Q13065 139 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 TM4SF20Q53R12 229 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 CT83Q5H943 113 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 ACANP16112 2415 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 RBAKDNA6NC62 111 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZNF705FA8MVS1 300 aaPredicted RBP8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 COX8CQ7Z4L0 72 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 GBGT1Q8N5D6 347 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 ZC2HC1AQ96GY0 325 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 RHPN1-AS1Q9BWJ2 59 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 RPP21Q9H633 154 aaKnown RBP8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 SMPXQ9UHP9 88 aa8.72□□□□□ -1.01
SMARCAL1-203ENST00000392128 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 MYO9AB2RTY4 2548 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BKO60814 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 P01737 135 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BJP06899 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BOP23527 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BBP33778 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BDP58876 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 SNRPEP62304 92 aaKnown RBP8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BCP62807 126 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms