RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 TMEM191AQ9H0A3 160 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 LOC400499M0QZD8 3231 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 C2CD3Q4AC94 2353 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
ERCC2-204ENST00000391945 ANKRD17O75179 2603 aaKnown RBP10.1□□□□□ -0.79
ERCC2-204ENST00000391945 PATE2Q6UY27 113 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 SIGLEC15Q6ZMC9 328 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 ZNF491Q8N8L2 437 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 TRAV9-1A0A075B6T8 112 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 IGHV3OR16-12A0A075B7B8 117 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 K7EN84 100 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 CKS2P33552 79 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 VAMP3Q15836 100 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 GNB1LQ9BYB4 327 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 FN1P02751 2386 aaKnown RBP10.1□□□□□ -0.79
ERCC2-204ENST00000391945 LOC102724200A0A096LPH7 203 aaPredicted RBP10.1□□□□□ -0.79
ERCC2-204ENST00000391945 YPEL3P61236 119 aaPredicted RBP10.1□□□□□ -0.79
ERCC2-204ENST00000391945 PMCHL1Q16048 86 aa10.1□□□□□ -0.79
ERCC2-204ENST00000391945 ZNF418Q8TF45 676 aaPredicted RBP10.09□□□□□ -0.79
ERCC2-204ENST00000391945 A0A1B0GUT8 65 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 I3L2K1 104 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 PRSS1P07477 247 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 FCER1GP30273 86 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 SNRPD3P62318 126 aaKnown RBP10.09□□□□□ -0.79
ERCC2-204ENST00000391945 DEFB113Q30KQ7 82 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 Q71RC1 249 aaPredicted RBP10.09□□□□□ -0.79
ERCC2-204ENST00000391945 NUP35Q8NFH5 326 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 SOX21Q9Y651 276 aaPredicted RBP10.09□□□□□ -0.79
ERCC2-204ENST00000391945 HINT1P49773 126 aaPredicted RBP10.09□□□□□ -0.79
ERCC2-204ENST00000391945 TMEM249Q2WGJ8 235 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 ZNF664Q8N3J9 261 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 NPBQ8NG41 125 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 PMCHL2Q9BQD1 86 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 SLC50A1Q9BRV3 221 aa10.09□□□□□ -0.79
ERCC2-204ENST00000391945 TCF21O43680 179 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 FCN3O75636 299 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 FLNBO75369 2602 aaKnown RBP10.08□□□□□ -0.8
ERCC2-204ENST00000391945 M0R381 172 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 TTC9CQ8N5M4 171 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 ZFP30Q9Y2G7 519 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 PHLDA3Q9Y5J5 127 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 FBLN7Q53RD9 439 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 LCN12Q6JVE5 192 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 KCNS1Q96KK3 526 aa10.08□□□□□ -0.8
ERCC2-204ENST00000391945 TNFRSF13BO14836 293 aaPredicted RBP10.07□□□□□ -0.8
ERCC2-204ENST00000391945 ZNF324O75467 553 aaPredicted RBP10.07□□□□□ -0.8
ERCC2-204ENST00000391945 LINC01548A6NM66 108 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 ZNF688P0C7X2 276 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 TMEM136Q6ZRR5 245 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 V9GYV3 84 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 TRBV19A0A075B6N1 114 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 USMG5Q96IX5 58 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 RHPN1-AS1Q9BWJ2 59 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 FABP5P3A8MUU1 101 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
ERCC2-204ENST00000391945 PAX1P15863 534 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 SYNJ2BPP57105 145 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 LY96Q9Y6Y9 160 aa10.07□□□□□ -0.8
ERCC2-204ENST00000391945 PTTG1IPP53801 180 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 ERCC8Q13216 396 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 NDUFAF3Q9BU61 184 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 AP5S1Q9NUS5 200 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 NBEAQ8NFP9 2946 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 ODF3BA8MYP8 253 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 RNASE4P34096 147 aaKnown RBP10.06□□□□□ -0.8
ERCC2-204ENST00000391945 LDLRAD2Q5SZI1 272 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 BCL6BQ8N143 479 aaPredicted RBP10.06□□□□□ -0.8
ERCC2-204ENST00000391945 CFHR4Q92496 578 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 TYMSP04818 313 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 ZNF138P52744 262 aa10.06□□□□□ -0.8
ERCC2-204ENST00000391945 BBC3Q96PG8 261 aaPredicted RBP10.06□□□□□ -0.8
ERCC2-204ENST00000391945 NDUFA3O95167 84 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 HLA-DMBP28068 263 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 FER1L6-AS1Q8NA97 138 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 PEF1Q9UBV8 284 aaKnown RBP10.05□□□□□ -0.8
ERCC2-204ENST00000391945 PRSS46E5RG02 174 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 F2Z2F3 143 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
ERCC2-204ENST00000391945 RPS20P60866 119 aaKnown RBP10.05□□□□□ -0.8
ERCC2-204ENST00000391945 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 RPLP1P05386 114 aaKnown RBP10.05□□□□□ -0.8
ERCC2-204ENST00000391945 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
ERCC2-204ENST00000391945 PRSS47A8MTI9 375 aa10.04□□□□□ -0.8
ERCC2-204ENST00000391945 H3BRN7 92 aa10.04□□□□□ -0.8
ERCC2-204ENST00000391945 PSG3Q16557 428 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms