RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 CCDC90BQ9GZT6 254 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 MYO7BQ6PIF6 2116 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 BCL9LQ86UU0 1499 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 CPDO75976 1380 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 TRAV26-2A0A0B4J265 109 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 TMEM213A2RRL7 107 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 HIGD1CA8MV81 97 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 CARD18P57730 90 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 LRRN1Q6UXK5 716 aa-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 SREK1IP1Q8N9Q2 155 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 HELZP42694 1942 aaKnown RBP-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 VIRMAQ69YN4 1812 aaKnown RBP-2.43□□□□□ -2.8
RNU6-239P-201ENST00000390990 FASNP49327 2511 aaKnown RBP-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 J3QRK9 145 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 APOA1P02647 267 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 CCDC172P0C7W6 258 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 SMIM17P0DL12 118 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 SSBP3-AS1Q7Z2R9 100 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 TMEM86BQ8N661 226 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 DNAJB3Q8WWF6 145 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 CST11Q9H112 138 aa-2.44□□□□□ -2.8
RNU6-239P-201ENST00000390990 USF3Q68DE3 2245 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 LAMA2P24043 3122 aaKnown RBP-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 ABCC11Q96J66 1382 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 OR4C46A6NHA9 309 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 ZNF815PA8K554 130 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 PHBP35232 272 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 AESQ08117 197 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 TMED1Q13445 227 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 DIAPH2-AS1Q14236 149 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 HACD4Q5VWC8 232 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 EIF5AL1Q6IS14 154 aaKnown RBP-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 OR4K15Q8NH41 348 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 ARL5BQ96KC2 179 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 BLMP54132 1417 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 EVC2Q86UK5 1308 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 DNAH3Q8TD57 4116 aa-2.45□□□□□ -2.8
RNU6-239P-201ENST00000390990 FAM159BA6NKW6 160 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 C9JAW5 83 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 IGF2P01344 180 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 TCRBP04435 133 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 C8orf88P0DMB2 117 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 HLA-EP13747 358 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 RPS12P25398 132 aaKnown RBP-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 ATP5G3P48201 142 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 PSME3P61289 254 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 PMS2P3Q13401 168 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 LINC00269Q8N2A0 174 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 SLC25A40Q8TBP6 338 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 SMIM11BQ8TCY0 68 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 DCUN1D5Q9BTE7 237 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 NPCDR1Q9BY65 106 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 ANK1P16157 1881 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 TACC2O95359 2948 aa-2.46□□□□□ -2.8
RNU6-239P-201ENST00000390990 URB1O60287 2271 aaKnown RBP-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 DEFA3P59666 94 aa-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 H3F3AP84243 136 aa-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 MLLT11Q13015 90 aaPredicted RBP-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 HIST2H3PS2Q5TEC6 136 aa-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 AP1S3Q96PC3 154 aa-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 MRPL36Q9P0J6 103 aaKnown RBP-2.47□□□□□ -2.8
RNU6-239P-201ENST00000390990 RAD50Q92878 1312 aa-2.47□□□□□ -2.81
RNU6-239P-201ENST00000390990 DLEC1Q9Y238 1755 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 C1QBP02746 253 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 UBE2BP63146 152 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 Q6Q795 121 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 PLEKHJ1Q9NW61 149 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 TVP23BQ9NYZ1 205 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 PKHD1L1Q86WI1 4243 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 MYO18BQ8IUG5 2567 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 DOCK11Q5JSL3 2073 aa-2.48□□□□□ -2.81
RNU6-239P-201ENST00000390990 KIAA1549LQ6ZVL6 1849 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 FAM236DA0A1B0GTK5 79 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 H0Y980 276 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 APODP05090 189 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 FAM236CP0DP71 79 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 IDO1P14902 403 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 BLVRAP53004 296 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 TCL1AP56279 114 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 EMX2Q04743 252 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 KLRD1Q13241 179 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 RRN3P1Q2M238 152 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 BCL2L15Q5TBC7 163 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 RAB8BQ92930 207 aa-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 NOSIPQ9Y314 301 aaKnown RBP-2.49□□□□□ -2.81
RNU6-239P-201ENST00000390990 CDK12Q9NYV4 1490 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 CEP164Q9UPV0 1460 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 hCG_1818297A0A087WSY0 165 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 A0A0D9SFI3 127 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 A8MT66 165 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 TMEM256-PLSCR3K7ERE1 68 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 VMA21Q3ZAQ7 101 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 LYRM7Q5U5X0 104 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 GOLT1AQ6ZVE7 132 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 LSM5Q9Y4Y9 91 aaKnown RBP-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 FRMPD1Q5SYB0 1578 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 PI4KAP42356 2102 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 PLXNA1Q9UIW2 1896 aa-2.5□□□□□ -2.81
RNU6-239P-201ENST00000390990 KIAA0100Q14667 2235 aaKnown RBP-2.5□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms