RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 FXYD7P58549 80 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 AMTNQ6UX39 209 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 CSNK1G2-AS1Q8NCQ2 148 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 MUC7Q8TAX7 377 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 ZNF503Q96F45 646 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
IGHV3-53-201ENST00000390627 A0A0J9YWU9 116 aa10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 ZNF705EA8MWA4 302 aaPredicted RBP10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 BOLA2-SMG1P6H3BVE0 249 aa10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 AKAP14Q86UN6 197 aa10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 LYPD1Q8N2G4 141 aa10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
IGHV3-53-201ENST00000390627 C3orf84H3BNL1 204 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 M0R3E3 92 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 BCL2L11O43521 198 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 MIFP14174 115 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 ICAM4Q14773 271 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 AKR1C8PQ5T2L2 129 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 RAB24Q969Q5 203 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 PHYHIPLQ96FC7 376 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 C11orf68Q9H3H3 251 aaKnown RBP10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 GOLT1BQ9Y3E0 138 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 NBEAL2Q6ZNJ1 2754 aa10.93□□□□□ -0.66
IGHV3-53-201ENST00000390627 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 HMGB3O15347 200 aaKnown RBP10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 PFDN1O60925 122 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 STAG3L2P0CL84 134 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 STAG3L3P0CL85 134 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 ARL14EPLP0DKL9 152 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 EIF5AP63241 154 aaKnown RBP10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 SPINK13Q1W4C9 94 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 IGF2BP2-AS1Q96M15 143 aa10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
IGHV3-53-201ENST00000390627 M0R2Z0 102 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 INSP01308 110 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 C1QBP02746 253 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 CSN1S1P47710 185 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 ZNF705AQ6ZN79 300 aaPredicted RBP10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 TMUB2Q71RG4 321 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 Q8NAQ8 132 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 Q9H3A6 140 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 X6R8D5 127 aa10.91□□□□□ -0.66
IGHV3-53-201ENST00000390627 DNAH7Q8WXX0 4024 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 IGHV3OR16-12A0A075B7B8 117 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 CTXND1A0A1B0GTU2 59 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 NPIPB6E9PJ23 425 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 CXorf1O96002 111 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 TSPOP30536 169 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 CDKN1BP46527 198 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 FAM74A1Q5RGS3 127 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 NEU1Q99519 415 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 OTORQ9NRC9 128 aa10.9□□□□□ -0.66
IGHV3-53-201ENST00000390627 IGHV4-28A0A0C4DH34 117 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 SMIM9A6NGZ8 99 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 SEC11BP0C7V7 166 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 GCHFRP30047 84 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 BAP18Q8IXM2 172 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 TMEM208Q9BTX3 173 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 TMEM167BQ9NRX6 74 aa10.89□□□□□ -0.67
IGHV3-53-201ENST00000390627 CRXO43186 299 aaPredicted RBP10.88□□□□□ -0.67
IGHV3-53-201ENST00000390627 TPT1P13693 172 aaKnown RBP10.88□□□□□ -0.67
IGHV3-53-201ENST00000390627 LEPP41159 167 aa10.88□□□□□ -0.67
IGHV3-53-201ENST00000390627 C1orf158Q8N1D5 194 aa10.88□□□□□ -0.67
IGHV3-53-201ENST00000390627 CMTM2Q8TAZ6 248 aa10.88□□□□□ -0.67
IGHV3-53-201ENST00000390627 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 PGPA6NDG6 321 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 UMAD1C9J7I0 102 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 DEFB4AO15263 64 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 HBE1P02100 147 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 CT45A10P0DMU9 189 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 ZNF726P1Q15940 193 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 C9orf47Q6ZRZ4 202 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 IQCF2Q8IXL9 164 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 TMEM256Q8N2U0 113 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 STOML3Q8TAV4 291 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 SUN5Q8TC36 379 aa10.87□□□□□ -0.67
IGHV3-53-201ENST00000390627 TMEM189A5PLL7 270 aa10.86□□□□□ -0.67
IGHV3-53-201ENST00000390627 SLC25A5P05141 298 aaKnown RBP10.86□□□□□ -0.67
IGHV3-53-201ENST00000390627 RBMY1A1P0DJD3 496 aaKnown RBP10.86□□□□□ -0.67
IGHV3-53-201ENST00000390627 RBMY1CP0DJD4 496 aa10.86□□□□□ -0.67
IGHV3-53-201ENST00000390627 ERCC8Q13216 396 aa10.86□□□□□ -0.67
IGHV3-53-201ENST00000390627 RBMY1FQ15415 496 aaKnown RBP10.86□□□□□ -0.67
IGHV3-53-201ENST00000390627 RRN3P1Q2M238 152 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms