RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZGRF1Q86YA3 2104 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 K7EM74 188 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 RNF183Q96D59 192 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 TPPP3Q9BW30 176 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 OTORQ9NRC9 128 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 ATRXP46100 2492 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 FOXI1Q12951 378 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 KLRD1Q13241 179 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 SYT8Q8NBV8 401 aa11.62□□□□□ -0.55
VPS9D1-201ENST00000389386 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 SRRM5B3KS81 715 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 APOMO95445 188 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 MT-ATP8P03928 68 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 PRRG2O14669 202 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 Q6AWC8 147 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 RND1Q92730 232 aa11.61□□□□□ -0.55
VPS9D1-201ENST00000389386 CNIH1O95406 144 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 RRN3P1Q2M238 152 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 MRPL51Q4U2R6 128 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 NBASA2RRP1 2371 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 TRAV17A0A0B4J275 112 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 TMEM213A2RRL7 107 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 IGHG3P01860 377 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 CRIP1P50238 77 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 Q6ZT83 130 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 SSUH2Q9Y2M2 353 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 KALRNO60229 2985 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
VPS9D1-201ENST00000389386 EVI2AP22794 236 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 ZNRD1Q9P1U0 126 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 SUB1P53999 127 aaKnown RBP eCLIP11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 ASCL2Q99929 193 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 RAB9BQ9NP90 201 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 AGRNO00468 2067 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 NPYP01303 97 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 TAL2Q16559 108 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 C10orf55Q5SWW7 151 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 Q6ZUT4 128 aa11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
VPS9D1-201ENST00000389386 RELNP78509 3460 aa11.58□□□□□ -0.55
VPS9D1-201ENST00000389386 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 XGP55808 180 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 FHL3Q13643 280 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 ATP6V0E2Q8NHE4 81 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 HARBI1Q96MB7 349 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 TRGV9Q99603 122 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 IGKCP01834 107 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 CECR9P0C854 216 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 HLA-DRB4P13762 266 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 LCNL1Q6ZST4 164 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 DKK4Q9UBT3 224 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 HLA-DRB4X5D2U9 266 aa11.58□□□□□ -0.56
VPS9D1-201ENST00000389386 POLEQ07864 2286 aa11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 C8orf46Q8TAG6 207 aa11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 ZNF71Q9NQZ8 489 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 TNFRSF18Q9Y5U5 241 aa11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 TNFRSF13BO14836 293 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 Q6ZS92 163 aa11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 NFE4Q86UQ8 179 aa11.57□□□□□ -0.56
VPS9D1-201ENST00000389386 CKS2P33552 79 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 SMCPP49901 116 aaPredicted RBP11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 GAGE5Q13069 117 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 GAGE6Q13070 117 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 IGFL2Q6UWQ7 119 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 SEM1Q6ZVN7 128 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 SMIM20Q8N5G0 67 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 ZC2HC1BQ5TFG8 222 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 TMEM75Q8N9X5 138 aa11.56□□□□□ -0.56
VPS9D1-201ENST00000389386 B5MCH6 92 aa11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 PRSS1P07477 247 aa11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 MRPL20Q9BYC9 149 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 DSCAMO60469 2012 aa11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 CFAP126Q5VTH2 177 aa11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 OR10X1Q8NGY0 326 aa11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 MSRB2Q9Y3D2 182 aa11.55□□□□□ -0.56
VPS9D1-201ENST00000389386 DPM2O94777 84 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 TNFRSF1AP19438 455 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 MZT1Q08AG7 82 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 SPRNQ5BIV9 151 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 DUX4L9Q6RFH8 374 aaPredicted RBP11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 TMEM14CQ9P0S9 112 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 LINC01546A6NGU7 62 aa11.54□□□□□ -0.56
VPS9D1-201ENST00000389386 CEACAM4O75871 244 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms