RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.29■□□□□ 0.84
MSX1-201ENST00000382723 MLXQ9UH92 298 aa20.29■□□□□ 0.84
MSX1-201ENST00000382723 TRAV8-2A0A0B4J237 113 aa20.29■□□□□ 0.84
MSX1-201ENST00000382723 ISLRO14498 428 aa20.29■□□□□ 0.84
MSX1-201ENST00000382723 CENPWQ5EE01 88 aa20.29■□□□□ 0.84
MSX1-201ENST00000382723 GBGT1Q8N5D6 347 aa20.29■□□□□ 0.84
MSX1-201ENST00000382723 ZNF705FA8MVS1 300 aaPredicted RBP20.28■□□□□ 0.84
MSX1-201ENST00000382723 GNG4P50150 75 aa20.28■□□□□ 0.84
MSX1-201ENST00000382723 UBE2G1P62253 170 aa20.28■□□□□ 0.84
MSX1-201ENST00000382723 RPL23P62829 140 aaKnown RBP20.28■□□□□ 0.84
MSX1-201ENST00000382723 DIRC3C9JPN6 131 aa20.27■□□□□ 0.84
MSX1-201ENST00000382723 PNRC1Q12796 327 aaPredicted RBP20.27■□□□□ 0.84
MSX1-201ENST00000382723 BTN1A1Q13410 526 aa20.27■□□□□ 0.84
MSX1-201ENST00000382723 RPS10P5Q9NQ39 176 aa20.27■□□□□ 0.84
MSX1-201ENST00000382723 TRAV8-1A0A0A6YYK1 113 aa20.26■□□□□ 0.83
MSX1-201ENST00000382723 CSN3P07498 182 aa20.26■□□□□ 0.83
MSX1-201ENST00000382723 LCN12Q6JVE5 192 aa20.26■□□□□ 0.83
MSX1-201ENST00000382723 C7orf77A4D0Y5 90 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 C9JCJ5 164 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 TMEM183BQ1AE95 376 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 LINC01551Q86U37 167 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 WFDC3Q8IUB2 231 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 OCC1Q8TAD7 63 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 IGF2BP2-AS1Q96M15 143 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 TAS2R60P59551 318 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 KLF12Q9Y4X4 402 aa20.25■□□□□ 0.83
MSX1-201ENST00000382723 SOCS3O14543 225 aa20.24■□□□□ 0.83
MSX1-201ENST00000382723 OVOL1O14753 267 aa20.24■□□□□ 0.83
MSX1-201ENST00000382723 TFPI2P48307 235 aa20.24■□□□□ 0.83
MSX1-201ENST00000382723 NHLRC2Q8NBF2 726 aa20.24■□□□□ 0.83
MSX1-201ENST00000382723 FMC1Q96HJ9 113 aa20.24■□□□□ 0.83
MSX1-201ENST00000382723 IGKV2-40A0A087WW87 121 aaPredicted RBP20.23■□□□□ 0.83
MSX1-201ENST00000382723 K7EQM0 130 aa20.23■□□□□ 0.83
MSX1-201ENST00000382723 IGKV2D-40P01614 121 aaPredicted RBP20.23■□□□□ 0.83
MSX1-201ENST00000382723 KRTAP24-1Q3LI83 254 aa20.23■□□□□ 0.83
MSX1-201ENST00000382723 MS4A6AQ9H2W1 248 aa20.23■□□□□ 0.83
MSX1-201ENST00000382723 RHEBQ15382 184 aa20.23■□□□□ 0.83
MSX1-201ENST00000382723 C20orf173Q96LM9 149 aa20.23■□□□□ 0.83
MSX1-201ENST00000382723 PRELID1Q9Y255 219 aa20.23■□□□□ 0.83
MSX1-201ENST00000382723 PRAC2D3DTV9 90 aa20.22■□□□□ 0.83
MSX1-201ENST00000382723 BAGE2Q86Y30 109 aa20.22■□□□□ 0.83
MSX1-201ENST00000382723 DYNLRB2Q8TF09 96 aa20.22■□□□□ 0.83
MSX1-201ENST00000382723 PSG3Q16557 428 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 PRNTQ86SH4 94 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 PRIMA1Q86XR5 153 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 K7EN84 100 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 DNASE2O00115 360 aaPredicted RBP20.21■□□□□ 0.83
MSX1-201ENST00000382723 IGLV2-11P01706 119 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 S100A9P06702 114 aaKnown RBP20.21■□□□□ 0.83
MSX1-201ENST00000382723 TMEM75Q8N9X5 138 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 DCANP1Q8TF63 244 aa20.21■□□□□ 0.83
MSX1-201ENST00000382723 ARL6IP6Q8N6S5 226 aa20.2■□□□□ 0.82
MSX1-201ENST00000382723 ASCL2Q99929 193 aa20.2■□□□□ 0.82
MSX1-201ENST00000382723 IGLV2-8P01709 118 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 MGST1P10620 155 aaKnown RBP20.19■□□□□ 0.82
MSX1-201ENST00000382723 TMEM88Q6PEY1 159 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 ZNF738Q8NE65 137 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 CLEC5AQ9NY25 188 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 LY96Q9Y6Y9 160 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 FLI1Q01543 452 aaPredicted RBP20.19■□□□□ 0.82
MSX1-201ENST00000382723 OR5I1Q13606 314 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 Q86TA4 180 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 ISOC2Q96AB3 205 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 CITED1Q99966 193 aa20.19■□□□□ 0.82
MSX1-201ENST00000382723 SERTM2A0A1B0GWG4 89 aa20.18■□□□□ 0.82
MSX1-201ENST00000382723 B4DEV8 164 aa20.18■□□□□ 0.82
MSX1-201ENST00000382723 TSPAN4O14817 238 aa20.18■□□□□ 0.82
MSX1-201ENST00000382723 PF4P02776 101 aa20.18■□□□□ 0.82
MSX1-201ENST00000382723 MRPL53Q96EL3 112 aaKnown RBP20.18■□□□□ 0.82
MSX1-201ENST00000382723 VGLL1Q99990 258 aa20.18■□□□□ 0.82
MSX1-201ENST00000382723 PSG8Q9UQ74 426 aa20.18■□□□□ 0.82
MSX1-201ENST00000382723 LTAP01374 205 aa20.17■□□□□ 0.82
MSX1-201ENST00000382723 RNF212Q495C1 297 aa20.17■□□□□ 0.82
MSX1-201ENST00000382723 RBPMS2Q6ZRY4 209 aaKnown RBP20.17■□□□□ 0.82
MSX1-201ENST00000382723 CBLN2Q8IUK8 224 aa20.17■□□□□ 0.82
MSX1-201ENST00000382723 ID1P41134 155 aa20.17■□□□□ 0.82
MSX1-201ENST00000382723 ERCC8Q13216 396 aa20.17■□□□□ 0.82
MSX1-201ENST00000382723 DEFB114Q30KQ6 69 aa20.17■□□□□ 0.82
MSX1-201ENST00000382723 FAM24BQ8N5W8 94 aa20.16■□□□□ 0.82
MSX1-201ENST00000382723 PAFAH1B2P68402 229 aa20.15■□□□□ 0.82
MSX1-201ENST00000382723 TMEM61Q8N0U2 210 aa20.15■□□□□ 0.82
MSX1-201ENST00000382723 DEFB1P60022 68 aa20.15■□□□□ 0.82
MSX1-201ENST00000382723 SAMD13Q5VXD3 122 aa20.15■□□□□ 0.82
MSX1-201ENST00000382723 K7EQG2 157 aa20.14■□□□□ 0.81
MSX1-201ENST00000382723 ZNF705DP0CH99 300 aaPredicted RBP20.14■□□□□ 0.81
MSX1-201ENST00000382723 ZNF705BP0CI00 300 aaPredicted RBP20.14■□□□□ 0.81
MSX1-201ENST00000382723 CD300EQ496F6 205 aaPredicted RBP20.14■□□□□ 0.81
MSX1-201ENST00000382723 TRBV6-1A0A0K0K1D8 114 aa20.14■□□□□ 0.81
MSX1-201ENST00000382723 MT-ND4LP03901 98 aa20.14■□□□□ 0.81
MSX1-201ENST00000382723 ZNF688P0C7X2 276 aa20.14■□□□□ 0.81
MSX1-201ENST00000382723 Q8TAT8 98 aa20.14■□□□□ 0.81
MSX1-201ENST00000382723 SFRP2Q96HF1 295 aa20.14■□□□□ 0.81
MSX1-201ENST00000382723 TENM1Q9UKZ4 2725 aa20.13■□□□□ 0.81
MSX1-201ENST00000382723 A0A087WWC5 75 aa20.13■□□□□ 0.81
MSX1-201ENST00000382723 SAP30O75446 220 aa20.13■□□□□ 0.81
MSX1-201ENST00000382723 GCGP01275 180 aa20.13■□□□□ 0.81
MSX1-201ENST00000382723 PRR27Q6MZM9 219 aa20.13■□□□□ 0.81
MSX1-201ENST00000382723 MLST8Q9BVC4 326 aa20.12■□□□□ 0.81
MSX1-201ENST00000382723 WNK1Q9H4A3 2382 aa20.12■□□□□ 0.81
MSX1-201ENST00000382723 RBAKDNA6NC62 111 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms