RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 RXFP4Q8TDU9 374 aa12.99□□□□□ -0.33
CD9-202ENST00000382515 ASCL2Q99929 193 aa12.99□□□□□ -0.33
CD9-202ENST00000382515 SLC17A3O00476 420 aa12.98□□□□□ -0.33
CD9-202ENST00000382515 AMBPP02760 352 aa12.98□□□□□ -0.33
CD9-202ENST00000382515 SNRPCP09234 159 aaKnown RBP12.98□□□□□ -0.33
CD9-202ENST00000382515 CSN1S1P47710 185 aa12.98□□□□□ -0.33
CD9-202ENST00000382515 RANP62826 216 aaKnown RBP12.98□□□□□ -0.33
CD9-202ENST00000382515 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
CD9-202ENST00000382515 PHYHIPLQ96FC7 376 aa12.98□□□□□ -0.33
CD9-202ENST00000382515 H3BTX0 84 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 ARL14EPLP0DKL9 152 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 GCHFRP30047 84 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 MBD3L1Q8WWY6 194 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 NKX6-2Q9C056 277 aaPredicted RBP12.97□□□□□ -0.33
CD9-202ENST00000382515 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 DNAH9Q9NYC9 4486 aa12.97□□□□□ -0.33
CD9-202ENST00000382515 CNN1P51911 297 aaKnown RBP12.96□□□□□ -0.33
CD9-202ENST00000382515 ICAM4Q14773 271 aa12.96□□□□□ -0.33
CD9-202ENST00000382515 GDF5OSQ5U4N7 250 aa12.96□□□□□ -0.33
CD9-202ENST00000382515 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
CD9-202ENST00000382515 RNF183Q96D59 192 aa12.96□□□□□ -0.33
CD9-202ENST00000382515 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
CD9-202ENST00000382515 A0A1W2PRE2 83 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 F6UB75 175 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
CD9-202ENST00000382515 SPRY2O43597 315 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 CA1P00915 261 aaPredicted RBP12.95□□□□□ -0.34
CD9-202ENST00000382515 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 ZNF726P1Q15940 193 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 Q9H3A6 140 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
CD9-202ENST00000382515 PGPA6NDG6 321 aa12.94□□□□□ -0.34
CD9-202ENST00000382515 ZNF705FA8MVS1 300 aaPredicted RBP12.94□□□□□ -0.34
CD9-202ENST00000382515 TEX46H3BTG2 121 aa12.94□□□□□ -0.34
CD9-202ENST00000382515 SLC25A5P05141 298 aaKnown RBP12.94□□□□□ -0.34
CD9-202ENST00000382515 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
CD9-202ENST00000382515 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
CD9-202ENST00000382515 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
CD9-202ENST00000382515 U3KQK5 164 aa12.94□□□□□ -0.34
CD9-202ENST00000382515 SERTM2A0A1B0GWG4 89 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 RBAKDNA6NC62 111 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 TSPOP30536 169 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 SULT1A2P50226 295 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 PPT1P50897 306 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 HIST1H1AQ02539 215 aaPredicted RBP12.93□□□□□ -0.34
CD9-202ENST00000382515 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 PLA2G2EQ9NZK7 142 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
CD9-202ENST00000382515 TRAV1-1A0A0B4J248 108 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 TRBV7-9A0A0J9YWB2 115 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 M0R3E3 92 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 NMBP08949 121 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
CD9-202ENST00000382515 DEFB1P60022 68 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 AMTNQ6UX39 209 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 FAM213BQ8TBF2 198 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 SFT2D1Q8WV19 159 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
CD9-202ENST00000382515 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
CD9-202ENST00000382515 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
CD9-202ENST00000382515 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
CD9-202ENST00000382515 FHITP49789 147 aa12.91□□□□□ -0.34
CD9-202ENST00000382515 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
CD9-202ENST00000382515 CSNK1G2-AS1Q8NCQ2 148 aa12.91□□□□□ -0.34
CD9-202ENST00000382515 FBLL1A6NHQ2 334 aaKnown RBP12.9□□□□□ -0.34
CD9-202ENST00000382515 EIF3GO75821 320 aaKnown RBP eCLIP12.9□□□□□ -0.34
CD9-202ENST00000382515 HBE1P02100 147 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 IQCF2Q8IXL9 164 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 C5orf17Q8NAS9 161 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 RARRES2Q99969 163 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 LENEPQ9Y5L5 61 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 NBEAL2Q6ZNJ1 2754 aa12.9□□□□□ -0.34
CD9-202ENST00000382515 DIRC3C9JPN6 131 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 BOLA2-SMG1P6H3BVE0 249 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 K7EQM0 130 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
CD9-202ENST00000382515 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
CD9-202ENST00000382515 CDKN1BP46527 198 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 NKX2-5P52952 324 aaPredicted RBP12.89□□□□□ -0.35
CD9-202ENST00000382515 SUMO1P63165 101 aaKnown RBP12.89□□□□□ -0.35
CD9-202ENST00000382515 IGF2BP2-AS1Q96M15 143 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 XCL2Q9UBD3 114 aa12.89□□□□□ -0.35
CD9-202ENST00000382515 SMIM9A6NGZ8 99 aa12.88□□□□□ -0.35
CD9-202ENST00000382515 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
CD9-202ENST00000382515 LEPP41159 167 aa12.88□□□□□ -0.35
CD9-202ENST00000382515 PMS2P11Q13670 270 aa12.88□□□□□ -0.35
CD9-202ENST00000382515 NEU1Q99519 415 aa12.88□□□□□ -0.35
CD9-202ENST00000382515 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
CD9-202ENST00000382515 GOLT1BQ9Y3E0 138 aa12.88□□□□□ -0.35
CD9-202ENST00000382515 FGF8P55075 233 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms