RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TEX36Q5VZQ5 186 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.99□□□□□ -0.65
SDC1-202ENST00000381150 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 A0A1B0GV72 72 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 HAX1O00165 279 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 HBDP02042 147 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 THBDP07204 575 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 VMA21Q3ZAQ7 101 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 SLC25A48Q6ZT89 311 aaKnown RBP10.99□□□□□ -0.65
SDC1-202ENST00000381150 ORMDL3Q8N138 153 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 J3QR89 54 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 K7EQM0 130 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 BOD1L2Q8IYS8 172 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 PSG8Q9UQ74 426 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 FCN3O75636 299 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 RAB9AP51151 201 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 RASL11BQ9BPW5 248 aa10.98□□□□□ -0.65
SDC1-202ENST00000381150 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 CNIH1O95406 144 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 OR4X2Q8NGF9 303 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 FOXC2Q99958 501 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 CEACAM3P40198 252 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 ADIPOQQ15848 244 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 Q8TAT8 98 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 TMEM133Q9H2Q1 129 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 MUC6Q6W4X9 2439 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 ORM1P02763 201 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 CKS1BP61024 79 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 KLF12Q9Y4X4 402 aa10.97□□□□□ -0.65
SDC1-202ENST00000381150 C16orf97H3BN30 126 aa10.96□□□□□ -0.65
SDC1-202ENST00000381150 NPYP01303 97 aa10.96□□□□□ -0.65
SDC1-202ENST00000381150 MYCNOSP40205 109 aa10.96□□□□□ -0.65
SDC1-202ENST00000381150 RPL27AP46776 148 aaKnown RBP10.96□□□□□ -0.65
SDC1-202ENST00000381150 POU2AF1Q16633 256 aa10.96□□□□□ -0.65
SDC1-202ENST00000381150 CHAC1Q9BUX1 264 aa10.96□□□□□ -0.65
SDC1-202ENST00000381150 SLC25A39Q9BZJ4 359 aaPredicted RBP10.96□□□□□ -0.65
SDC1-202ENST00000381150 NPIPB5A8MRT5 1133 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 GP9P14770 177 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 LEPP41159 167 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 CT83Q5H943 113 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 KLK15Q9H2R5 256 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 A0A096LNJ9 63 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 CGB1A6NKQ9 187 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 NPIPB6E9PJ23 425 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 TGFAP01135 160 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 INSL3P51460 131 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 C8orf46Q8TAG6 207 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 GFRA4Q9GZZ7 299 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 ZNF492Q9P255 531 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 COL6A6A6NMZ7 2263 aa10.96□□□□□ -0.66
SDC1-202ENST00000381150 CEP295Q9C0D2 2601 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 A0A1B0GWB2 263 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 SCGB2A2Q13296 93 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 ZNF479Q96JC4 524 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 HIST1H4GQ99525 98 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 VGLL1Q99990 258 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 MSRB1Q9NZV6 116 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 PRRG2O14669 202 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 NDUFS7O75251 213 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 MRPL51Q4U2R6 128 aaKnown RBP10.95□□□□□ -0.66
SDC1-202ENST00000381150 KLF17Q5JT82 389 aaPredicted RBP10.95□□□□□ -0.66
SDC1-202ENST00000381150 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
SDC1-202ENST00000381150 C17orf100A8MU93 164 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 IL4P05112 153 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 BSPH1Q075Z2 132 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 ATP6V0BQ99437 205 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
SDC1-202ENST00000381150 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
SDC1-202ENST00000381150 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
SDC1-202ENST00000381150 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
SDC1-202ENST00000381150 COX7A1P24310 79 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 FSTL3O95633 263 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 IGHV3-23P01764 117 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 APOBEC3AP31941 199 aaPredicted RBP10.94□□□□□ -0.66
SDC1-202ENST00000381150 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
SDC1-202ENST00000381150 LGALS9BQ3B8N2 356 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 C16orf54Q6UWD8 224 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 DEFB104AQ8WTQ1 72 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 FBXL15Q9H469 300 aa10.94□□□□□ -0.66
SDC1-202ENST00000381150 CREBBPQ92793 2442 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 TRAV26-1A0A087WT03 109 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 NDUFA3O95167 84 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 CD300EQ496F6 205 aaPredicted RBP10.93□□□□□ -0.66
SDC1-202ENST00000381150 ASCL5Q7RTU5 278 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 NOTCH3Q9UM47 2321 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 BMI1P35226 326 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 CRIP1P50238 77 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 TMEM167AQ8TBQ9 72 aa10.93□□□□□ -0.66
SDC1-202ENST00000381150 TRAV40A0A0B4J280 105 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 LINC00312Q9Y6C7 94 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms