RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ATP5J2P56134 94 aa11.22□□□□□ -0.61
CLCN4-201ENST00000380829 EBI3Q14213 229 aa11.22□□□□□ -0.61
CLCN4-201ENST00000380829 ZNF562Q6V9R5 426 aa11.22□□□□□ -0.61
CLCN4-201ENST00000380829 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
CLCN4-201ENST00000380829 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
CLCN4-201ENST00000380829 CELSR2Q9HCU4 2923 aa11.22□□□□□ -0.61
CLCN4-201ENST00000380829 LYZP61626 148 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 NRGNQ92686 78 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 PERPQ96FX8 193 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 FOXA3P55318 350 aaPredicted RBP11.21□□□□□ -0.61
CLCN4-201ENST00000380829 C10orf105Q8TEF2 133 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 FXYD5Q96DB9 178 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 LINC00479Q96M42 142 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.61
CLCN4-201ENST00000380829 IGHV1-24A0A0C4DH33 117 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 FAM106CPP0CH98 169 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 UFSP1Q6NVU6 142 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 BLNKQ8WV28 456 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-201ENST00000380829 CENPVL3A0A0U1RRI6 287 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 NPFFO15130 113 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 Q8N9W7 124 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 NUP35Q8NFH5 326 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 IGF2BP2-AS1Q96M15 143 aa11.2□□□□□ -0.62
CLCN4-201ENST00000380829 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
CLCN4-201ENST00000380829 HIST1H1AQ02539 215 aaPredicted RBP11.19□□□□□ -0.62
CLCN4-201ENST00000380829 KLF5Q13887 457 aaPredicted RBP11.19□□□□□ -0.62
CLCN4-201ENST00000380829 FANCD2OSQ96PS1 177 aa11.19□□□□□ -0.62
CLCN4-201ENST00000380829 IGHV7-81A0A0B4J1V7 117 aa11.19□□□□□ -0.62
CLCN4-201ENST00000380829 H3BTX0 84 aa11.19□□□□□ -0.62
CLCN4-201ENST00000380829 NPIPB5A8MRT5 1133 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
CLCN4-201ENST00000380829 GPR183P32249 361 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 PLP1P60201 277 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 C2orf91Q6ZV80 131 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 HIGD1AQ9Y241 93 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 IGLV11-55A0A075B6I3 123 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 PAX8Q06710 450 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 ZNF843Q8N446 348 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
CLCN4-201ENST00000380829 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 H3BUT2 72 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 EGR2P11161 476 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-201ENST00000380829 BRD3OSQ6XYD6 125 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 TTC9CQ8N5M4 171 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-201ENST00000380829 C1RLQ9NZP8 487 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 GP9P14770 177 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 TCTAP57738 103 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 GNG5P63218 68 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 TMEM191AQ9H0A3 160 aa11.17□□□□□ -0.62
CLCN4-201ENST00000380829 TRAV40A0A0B4J280 105 aa11.16□□□□□ -0.62
CLCN4-201ENST00000380829 A1L4Q6 167 aa11.16□□□□□ -0.62
CLCN4-201ENST00000380829 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
CLCN4-201ENST00000380829 ZNF138P52744 262 aa11.16□□□□□ -0.62
CLCN4-201ENST00000380829 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-201ENST00000380829 OR2J3O76001 311 aa11.16□□□□□ -0.62
CLCN4-201ENST00000380829 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
CLCN4-201ENST00000380829 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 ECSCRQ19T08 205 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 GTF2H5Q6ZYL4 71 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 RAB37Q96AX2 223 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 MBD6Q96DN6 1003 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 AP1S3Q96PC3 154 aa11.15□□□□□ -0.62
CLCN4-201ENST00000380829 PEX7O00628 323 aa11.15□□□□□ -0.63
CLCN4-201ENST00000380829 IL4P05112 153 aa11.15□□□□□ -0.63
CLCN4-201ENST00000380829 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.63
CLCN4-201ENST00000380829 TMUB1Q9BVT8 246 aa11.15□□□□□ -0.63
CLCN4-201ENST00000380829 THYN1Q9P016 225 aa11.15□□□□□ -0.63
CLCN4-201ENST00000380829 FBN2P35556 2912 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 IGHV1-69DA0A0B4J2H0 117 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 PGPA6NDG6 321 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-201ENST00000380829 K7EP34 96 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 ATP6V0E1O15342 81 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 IGHV1-69P01742 117 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 MYCNOSP40205 109 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 PRSS57Q6UWY2 283 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 SGK494Q96LW2 274 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 SLC25A5P05141 298 aaKnown RBP11.14□□□□□ -0.63
CLCN4-201ENST00000380829 HIST1H1EP10412 219 aaKnown RBP11.14□□□□□ -0.63
CLCN4-201ENST00000380829 MFAP4P55083 255 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 TMEM97Q5BJF2 176 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-201ENST00000380829 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 RNF125Q96EQ8 232 aa11.14□□□□□ -0.63
CLCN4-201ENST00000380829 C21orf62Q9NYP8 219 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms