RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ZNF702PQ9H963 129 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 ZNF492Q9P255 531 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 ZFP30Q9Y2G7 519 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 UNC79Q9P2D8 2635 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 SERTM2A0A1B0GWG4 89 aa15.21■□□□□ 0.03
PDLIM5-205ENST00000380180 ZNF705FA8MVS1 300 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-205ENST00000380180 CHEK1O14757 476 aa15.21■□□□□ 0.03
PDLIM5-205ENST00000380180 FAM209BQ5JX69 171 aa15.21■□□□□ 0.03
PDLIM5-205ENST00000380180 IGKV2-40A0A087WW87 121 aaPredicted RBP15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 TMEM89A2RUT3 159 aa15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 IGKV2D-40P01614 121 aaPredicted RBP15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 CBLN1P23435 193 aa15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 C16orf54Q6UWD8 224 aa15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 DAZAP1Q96EP5 407 aaKnown RBP15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 PEF1Q9UBV8 284 aaKnown RBP15.21■□□□□ 0.02
PDLIM5-205ENST00000380180 IZUMO1RA6ND01 250 aa15.2■□□□□ 0.02
PDLIM5-205ENST00000380180 P01737 135 aa15.2■□□□□ 0.02
PDLIM5-205ENST00000380180 LCN12Q6JVE5 192 aa15.2■□□□□ 0.02
PDLIM5-205ENST00000380180 ZC2HC1AQ96GY0 325 aa15.2■□□□□ 0.02
PDLIM5-205ENST00000380180 TEX29Q8N6K0 151 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 TSKUQ8WUA8 353 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 RPP21Q9H633 154 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 RPL19P84098 196 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 GFI1BQ5VTD9 330 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 GBGT1Q8N5D6 347 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 RNF182Q8N6D2 247 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 GLMPQ8WWB7 406 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 SLC50A1Q9BRV3 221 aa15.19■□□□□ 0.02
PDLIM5-205ENST00000380180 ACANP16112 2415 aa15.18■□□□□ 0.02
PDLIM5-205ENST00000380180 RPLP1P05386 114 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-205ENST00000380180 CDX1P47902 265 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-205ENST00000380180 NUP35Q8NFH5 326 aa15.18■□□□□ 0.02
PDLIM5-205ENST00000380180 C8orf49Q96NF6 230 aa15.18■□□□□ 0.02
PDLIM5-205ENST00000380180 NEU1Q99519 415 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 GNB1LQ9BYB4 327 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 NAT8BQ9UHF3 227 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 NPIPB6E9PJ23 425 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 KRTAP1-1Q07627 177 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 MRPL54Q6P161 138 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 C8orf86Q6ZUL3 223 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 VGLL1Q99990 258 aa15.17■□□□□ 0.02
PDLIM5-205ENST00000380180 HIGD1CA8MV81 97 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 A8MWL6 223 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 SNURFLB1AK76 121 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 MEOX2P50222 304 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 CT83Q5H943 113 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 MRPL18Q9H0U6 180 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 TRAV8-2A0A0B4J237 113 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 XKRY2A2RUG3 117 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 CRIP1P50238 77 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 FOXE3Q13461 319 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 TM4SF20Q53R12 229 aa15.16■□□□□ 0.02
PDLIM5-205ENST00000380180 IFITM10A6NMD0 228 aa15.15■□□□□ 0.02
PDLIM5-205ENST00000380180 PRAC2D3DTV9 90 aa15.15■□□□□ 0.02
PDLIM5-205ENST00000380180 TCF24Q7RTU0 167 aa15.15■□□□□ 0.02
PDLIM5-205ENST00000380180 Q8N2B8 174 aa15.15■□□□□ 0.02
PDLIM5-205ENST00000380180 A0A1W2PS18 150 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 FBLL1A6NHQ2 334 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 ELANEP08246 267 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 PDZD11Q5EBL8 140 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 LINC00518Q8N0U6 118 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 HIST3H2BBQ8N257 126 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 GTSF1Q8WW33 167 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 PRR25Q96S07 402 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 CD5LO43866 347 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 COX19Q49B96 90 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 FAM106AQ4KMX7 169 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 SAPCD1Q5SSQ6 148 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 WDR73Q6P4I2 378 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 GPHB5Q86YW7 130 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 OR4B1Q8NGF8 309 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 Q8TAT8 98 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 GPR61Q9BZJ8 451 aa15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 DAZ1Q9NQZ3 744 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-205ENST00000380180 MYO9AB2RTY4 2548 aa15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 FASNP49327 2511 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 IGHV7-4-1A0A0J9YVY3 117 aa15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 RAB4BP61018 213 aa15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 TMEM86BQ8N661 226 aa15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 OR2D3Q8NGH3 330 aa15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 MYOZ3Q8TDC0 251 aa15.13■□□□□ 0.01
PDLIM5-205ENST00000380180 CT45A10P0DMU9 189 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 ERCC8Q13216 396 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 C16orf92Q96LL3 132 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 RHPN1-AS1Q9BWJ2 59 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 GFRA4Q9GZZ7 299 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 YAE1D1Q9NRH1 226 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 MT-ND6P03923 174 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 GZMBP10144 247 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 COA6Q5JTJ3 125 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 COX8CQ7Z4L0 72 aa15.12■□□□□ 0.01
PDLIM5-205ENST00000380180 RBAKDNA6NC62 111 aa15.11■□□□□ 0.01
PDLIM5-205ENST00000380180 K7EMT4 169 aa15.11■□□□□ 0.01
PDLIM5-205ENST00000380180 S100A8P05109 93 aa15.11■□□□□ 0.01
PDLIM5-205ENST00000380180 HECTD1Q9ULT8 2610 aa15.11■□□□□ 0.01
PDLIM5-205ENST00000380180 RASL11AQ6T310 242 aa15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 RNF152Q8N8N0 203 aa15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 WIPF2Q8TF74 440 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 UBE2E2Q96LR5 201 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms