RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 C18orf32Q8TCD1 76 aa16.76■□□□□ 0.27
TRIM54-202ENST00000380075 RHOGP84095 191 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 FAM209BQ5JX69 171 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 REC114Q7Z4M0 266 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 BCL6BQ8N143 479 aaPredicted RBP16.75■□□□□ 0.27
TRIM54-202ENST00000380075 OR2D3Q8NGH3 330 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 IGHV1-69DA0A0B4J2H0 117 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 A0A1W2PS18 150 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 A8MWP6 167 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 IGHV1-69P01742 117 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 CAMPP49913 170 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 MOB4Q9Y3A3 225 aa16.75■□□□□ 0.27
TRIM54-202ENST00000380075 ABCA1O95477 2261 aa16.74■□□□□ 0.27
TRIM54-202ENST00000380075 MED13LQ71F56 2210 aa16.74■□□□□ 0.27
TRIM54-202ENST00000380075 SVEP1Q4LDE5 3571 aa16.74■□□□□ 0.27
TRIM54-202ENST00000380075 ZNF324O75467 553 aaPredicted RBP16.74■□□□□ 0.27
TRIM54-202ENST00000380075 FAM162BQ5T6X4 162 aa16.74■□□□□ 0.27
TRIM54-202ENST00000380075 ZC2HC1AQ96GY0 325 aa16.74■□□□□ 0.27
TRIM54-202ENST00000380075 ATP6V0BQ99437 205 aa16.74■□□□□ 0.27
TRIM54-202ENST00000380075 ALKBH7Q9BT30 221 aaPredicted RBP16.74■□□□□ 0.27
TRIM54-202ENST00000380075 HIVEP1P15822 2718 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 ACANP16112 2415 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 AMTP48728 403 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 PGLYRP4Q96LB8 373 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 RCHY1Q96PM5 261 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 C1orf194Q5T5A4 169 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 Q6AWC8 147 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 EEF1AKMT3Q96AZ1 226 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 C14orf144Q96I85 54 aa16.73■□□□□ 0.27
TRIM54-202ENST00000380075 TRBV7-1A0A0A6YYK4 115 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 M0R3E3 92 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 HAX1O00165 279 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 CT45A10P0DMU9 189 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 GPR183P32249 361 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 CRIP2P52943 208 aaPredicted RBP16.72■□□□□ 0.27
TRIM54-202ENST00000380075 COX8CQ7Z4L0 72 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 MEGF9Q9H1U4 602 aa16.72■□□□□ 0.27
TRIM54-202ENST00000380075 ZNF705FA8MVS1 300 aaPredicted RBP16.71■□□□□ 0.27
TRIM54-202ENST00000380075 ZNF705DP0CH99 300 aaPredicted RBP16.71■□□□□ 0.27
TRIM54-202ENST00000380075 ZNF705BP0CI00 300 aaPredicted RBP16.71■□□□□ 0.27
TRIM54-202ENST00000380075 ZNF785A8K8V0 405 aa16.71■□□□□ 0.27
TRIM54-202ENST00000380075 SAPCD1Q5SSQ6 148 aa16.71■□□□□ 0.27
TRIM54-202ENST00000380075 TEX43Q6ZNM6 134 aa16.71■□□□□ 0.27
TRIM54-202ENST00000380075 NRN1Q9NPD7 142 aa16.71■□□□□ 0.27
TRIM54-202ENST00000380075 KIR2DL5BA0A0G2JN68 375 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 KIR2DL5BA0A0G2JPC4 375 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 A0A1B0GW15 77 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 TOMM20LQ6UXN7 152 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 KIR2DL5AQ8N109 375 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 SSBP4Q9BWG4 385 aaPredicted RBP16.7■□□□□ 0.26
TRIM54-202ENST00000380075 ZFAND3Q9H8U3 227 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 CR1P17927 2039 aa16.7■□□□□ 0.26
TRIM54-202ENST00000380075 A0A087X0K7 114 aa16.69■□□□□ 0.26
TRIM54-202ENST00000380075 CLEC3BP05452 202 aa16.69■□□□□ 0.26
TRIM54-202ENST00000380075 IGHV4-31P0DP07 118 aa16.69■□□□□ 0.26
TRIM54-202ENST00000380075 SMR3AQ99954 134 aa16.69■□□□□ 0.26
TRIM54-202ENST00000380075 NDUFAF3Q9BU61 184 aa16.69■□□□□ 0.26
TRIM54-202ENST00000380075 SH2D7A6NKC9 451 aaPredicted RBP16.69■□□□□ 0.26
TRIM54-202ENST00000380075 PMCHP20382 165 aa16.69■□□□□ 0.26
TRIM54-202ENST00000380075 CHEK1O14757 476 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 APOHP02749 345 aaPredicted RBP16.68■□□□□ 0.26
TRIM54-202ENST00000380075 CCDC140Q96MF4 163 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 SMAD5-AS1Q9Y6J3 95 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 TRAV40A0A0B4J280 105 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 A0A1B0GUT8 65 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 G3V318 75 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 RELQ04864 619 aaPredicted RBP16.68■□□□□ 0.26
TRIM54-202ENST00000380075 RIGQ13278 110 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 GATD1Q8NB37 220 aa16.68■□□□□ 0.26
TRIM54-202ENST00000380075 FAM223BA6NKX1 122 aa16.67■□□□□ 0.26
TRIM54-202ENST00000380075 C19orf54Q5BKX5 351 aa16.67■□□□□ 0.26
TRIM54-202ENST00000380075 DMRTA1Q5VZB9 504 aa16.67■□□□□ 0.26
TRIM54-202ENST00000380075 FAM223AQ8IWN6 122 aa16.67■□□□□ 0.26
TRIM54-202ENST00000380075 PIFOQ8TCI5 191 aa16.67■□□□□ 0.26
TRIM54-202ENST00000380075 WNK2Q9Y3S1 2297 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 CSPG4Q6UVK1 2322 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 ABCA2Q9BZC7 2435 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 TRAV41A0A0B4J266 112 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 B4DSR2 109 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 BUB3O43684 328 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 HSBP1O75506 76 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 CRIP1P50238 77 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 KRTAP1-1Q07627 177 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 CYB5R2Q6BCY4 276 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 LINC01356Q8N9X3 169 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 NDFIP1Q9BT67 221 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 LINC01548A6NM66 108 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 ATP5G2Q06055 141 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 CLEC19AQ6UXS0 136 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 LURAP1LQ8IV03 231 aa16.66■□□□□ 0.26
TRIM54-202ENST00000380075 TGFAP01135 160 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 MSMBP08118 114 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 CD33P20138 364 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 KRTDAPP60985 99 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 LBHQ53QV2 105 aaPredicted RBP16.65■□□□□ 0.26
TRIM54-202ENST00000380075 Q71RC1 249 aaPredicted RBP16.65■□□□□ 0.26
TRIM54-202ENST00000380075 NIT1Q86X76 327 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 BORCS7Q96B45 105 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 SLC50A1Q9BRV3 221 aa16.65■□□□□ 0.26
TRIM54-202ENST00000380075 FOSL1P15407 271 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms