RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 IGHV3-48P01763 117 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 APCSP02743 223 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM11P17152 192 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 PRB3Q04118 309 aaPredicted RBP6□□□□□ -1.45
CDKL5-202ENST00000379996 GAGE1Q13065 139 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 VN1R17PQ8TDU5 208 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 FMC1Q96HJ9 113 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 ATG101Q9BSB4 218 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 TNFRSF19Q9NS68 423 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 VPREB3Q9UKI3 123 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 ITPR3Q14573 2671 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 IGLC2P0DOY2 106 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 CD300EQ496F6 205 aaPredicted RBP6□□□□□ -1.45
CDKL5-202ENST00000379996 C19orf54Q5BKX5 351 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 MRPL54Q6P161 138 aaKnown RBP6□□□□□ -1.45
CDKL5-202ENST00000379996 EBLN2Q6P2I7 272 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 PPP1R27Q86WC6 154 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 OR4B1Q8NGF8 309 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF586Q9NXT0 402 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 AKAP6Q13023 2319 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 SPINK4O60575 86 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF253O75346 499 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 TCRAP04437 139 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 IGLC3P0DOY3 106 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF562Q6V9R5 426 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 Q86TA4 180 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM190Q8WZ59 177 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 ABCA12Q86UK0 2595 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 K7EIM0 57 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 IGKV1-17P01599 117 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 SUB1P53999 127 aaKnown RBP eCLIP5.99□□□□□ -1.45
CDKL5-202ENST00000379996 TNXAQ16473 311 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 COX8CQ7Z4L0 72 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 BAGE3Q86Y29 109 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 BAGE2Q86Y30 109 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 STXBP6Q8NFX7 210 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 FAM231BA6NCW3 169 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 HIGD1CA8MV81 97 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 TCAPO15273 167 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 HYPMO75409 117 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 IGF1P05019 195 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 USF2Q15853 346 aaPredicted RBP5.99□□□□□ -1.45
CDKL5-202ENST00000379996 ETFRF1Q6IPR1 90 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 C17orf77Q96MU5 243 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 GPR82Q96P67 336 aa5.99□□□□□ -1.45
CDKL5-202ENST00000379996 RPP21Q9H633 154 aaKnown RBP5.99□□□□□ -1.45
CDKL5-202ENST00000379996 FAM181BA6NEQ2 426 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 NDUFB8O95169 186 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 RNF151Q2KHN1 245 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 C5orf17Q8NAS9 161 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 OR4F17Q8NGA8 305 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 PLXNB1O43157 2135 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 WI2-2373I1.2A0A1W2PRP0 233 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 A0A1W2PRX2 142 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 DIRC3C9JPN6 131 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 H3BRN7 92 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 CRLF1O75462 422 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 MGST1P10620 155 aaKnown RBP5.98□□□□□ -1.45
CDKL5-202ENST00000379996 RPL27AP46776 148 aaKnown RBP5.98□□□□□ -1.45
CDKL5-202ENST00000379996 HILS1P60008 231 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF124Q15973 351 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 SIGLECL1Q8N7X8 197 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 VAMP8Q9BV40 100 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 Q9H3A6 140 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 PAM16Q9Y3D7 125 aa5.98□□□□□ -1.45
CDKL5-202ENST00000379996 SOX21Q9Y651 276 aaPredicted RBP5.98□□□□□ -1.45
CDKL5-202ENST00000379996 FASNP49327 2511 aaKnown RBP5.98□□□□□ -1.45
CDKL5-202ENST00000379996 NPIPB5A8MRT5 1133 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 H3BUX3 64 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 IGHG2P01859 326 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
CDKL5-202ENST00000379996 NBEAP1P0C6P0 100 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 HIST1H1EP10412 219 aaKnown RBP5.97□□□□□ -1.45
CDKL5-202ENST00000379996 IGHV3OR16-10A0A075B7F0 116 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 IGHV3-72A0A0B4J1Y9 119 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM89A2RUT3 159 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 CYSRT1A8MQ03 144 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 H3BUA1 57 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 PSG1P11464 419 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 MAJINQ3KP22 176 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 SIGLEC15Q6ZMC9 328 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 FAM19A2Q8N3H0 131 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM75Q8N9X5 138 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 SLC25A39Q9BZJ4 359 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-202ENST00000379996 C16orf95Q9H693 158 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 OTORQ9NRC9 128 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 HECTD1Q9ULT8 2610 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 IGHV7-81A0A0B4J1V7 117 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF705FA8MVS1 300 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF705DP0CH99 300 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF705BP0CI00 300 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-202ENST00000379996 SRD5A1P18405 259 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 AMTP48728 403 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 CRIP1P50238 77 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 TTC9CQ8N5M4 171 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 OR1B1Q8NGR6 318 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM208Q9BTX3 173 aa5.97□□□□□ -1.45
CDKL5-202ENST00000379996 PGPA6NDG6 321 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 EGR2P11161 476 aaPredicted RBP5.96□□□□□ -1.45
CDKL5-202ENST00000379996 LEMD1Q68G75 181 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms