RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 HLA-DRB4X5D2U9 266 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 SHISA9B4DS77 424 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 IGLC6P0CF74 106 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 HERVK_113P63121 156 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 UBE2L3P68036 154 aaKnown RBP5.93□□□□□ -1.46
CDKL5-201ENST00000379989 PSMG4Q5JS54 123 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 MDP1Q86V88 176 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 ITLN1Q8WWA0 313 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 MLST8Q9BVC4 326 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 EPDR1Q9UM22 224 aa5.93□□□□□ -1.46
CDKL5-201ENST00000379989 KLK5Q9Y337 293 aaPredicted RBP5.93□□□□□ -1.46
CDKL5-201ENST00000379989 LINC01549A6NIU2 74 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 FAM167A-AS1Q96KT0 104 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 HES7Q9BYE0 225 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 DEFB127Q9H1M4 99 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 VPS13AQ96RL7 3174 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 MYMXA0A1B0GTQ4 84 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 TNFRSF6BO95407 300 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 C8orf88P0DMB2 117 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 IGHV1-2P23083 117 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 CCL11P51671 97 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 ASCL5Q7RTU5 278 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 SLC25A2Q9BXI2 301 aa5.92□□□□□ -1.46
CDKL5-201ENST00000379989 LINC00473A8K010 186 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 EMP1P54849 157 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 ZNF493Q6ZR52 646 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 PRSS33Q8NF86 280 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 INTS1Q8N201 2190 aaKnown RBP5.91□□□□□ -1.46
CDKL5-201ENST00000379989 IGKV1OR2-108A0A075B7D4 117 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 IGKCP01834 107 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 ARMS2P0C7Q2 107 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 PYYP10082 97 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 ZNF71Q9NQZ8 489 aaPredicted RBP5.91□□□□□ -1.46
CDKL5-201ENST00000379989 DLL1O00548 723 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 SPINK2P20155 84 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 ZNF672Q499Z4 452 aaPredicted RBP5.91□□□□□ -1.46
CDKL5-201ENST00000379989 C9orf153Q5TBE3 101 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 WDR31Q8NA23 367 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 FAM57AQ8TBR7 257 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
CDKL5-201ENST00000379989 D6R8Y8 96 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 PATE4P0C8F1 98 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 ORM2P19652 201 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 DUTP33316 252 aaKnown RBP5.9□□□□□ -1.46
CDKL5-201ENST00000379989 FOXC1Q12948 553 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 HES1Q14469 280 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 GATD1Q8NB37 220 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 MRAPQ8TCY5 172 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 TRGV9Q99603 122 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 CALYQ9NYX4 217 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 A0A1B0GUT8 65 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 M0R2P5 195 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 MSRB2Q9Y3D2 182 aa5.9□□□□□ -1.46
CDKL5-201ENST00000379989 TMEM30CPA0ZSE6 113 aa5.9□□□□□ -1.47
CDKL5-201ENST00000379989 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.47
CDKL5-201ENST00000379989 DEFB109BQ30KR1 87 aa5.9□□□□□ -1.47
CDKL5-201ENST00000379989 ZNF497Q6ZNH5 498 aa5.9□□□□□ -1.47
CDKL5-201ENST00000379989 NUP37Q8NFH4 326 aa5.9□□□□□ -1.47
CDKL5-201ENST00000379989 A0A096LPE4 126 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 TRAV3A0A0B4J244 114 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 A0A1W2PPZ6 126 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 OR2H2O95918 312 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 NPYP01303 97 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 CD7P09564 240 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 CECR9P0C854 216 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 TNFAIP6P98066 277 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-201ENST00000379989 SRSF9Q13242 221 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDKL5-201ENST00000379989 TMEM219Q86XT9 240 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 CFHR4Q92496 578 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 NPIPB3Q92617 1050 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 OOEPA6NGQ2 149 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 PCNX2A6NKB5 2137 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 LINC01619G3V211 115 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 FSTL3O95633 263 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 IGHV3-13P01766 116 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 SLC25A48Q6ZT89 311 aaKnown RBP5.89□□□□□ -1.47
CDKL5-201ENST00000379989 C11orf53Q8IXP5 236 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 SLC25A15Q9Y619 301 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 CACNA1GO43497 2377 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 SLC25A20O43772 301 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 MYCNOSP40205 109 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 UBE2D1P51668 147 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 C4orf26Q17RF5 130 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 PDPNQ86YL7 162 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 VKORC1L1Q8N0U8 176 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 Q8N1Y9 231 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 C3orf22Q8N5N4 141 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 OR11H6Q8NGC7 330 aa5.89□□□□□ -1.47
CDKL5-201ENST00000379989 DPM2O94777 84 aa5.88□□□□□ -1.47
CDKL5-201ENST00000379989 HSPE1P61604 102 aaKnown RBP5.88□□□□□ -1.47
CDKL5-201ENST00000379989 LYRM7Q5U5X0 104 aa5.88□□□□□ -1.47
CDKL5-201ENST00000379989 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
CDKL5-201ENST00000379989 C9orf106Q8NAJ2 232 aa5.88□□□□□ -1.47
CDKL5-201ENST00000379989 ZNRF2Q8NHG8 242 aa5.88□□□□□ -1.47
CDKL5-201ENST00000379989 KLF14Q8TD94 323 aaPredicted RBP5.88□□□□□ -1.47
CDKL5-201ENST00000379989 U3KQK5 164 aa5.88□□□□□ -1.47
CDKL5-201ENST00000379989 DCHS1Q96JQ0 3298 aa5.88□□□□□ -1.47
CDKL5-201ENST00000379989 TRAV2A0A0B4J234 112 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms