RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 RNF182Q8N6D2 247 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 OR4B1Q8NGF8 309 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 TRAV41A0A0B4J266 112 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 MUC21A0A0G2JKD1 596 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 MUC21A0A140T8X8 626 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 TMEM8BA6NDV4 472 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 IGHG4P01861 327 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 CT45A10P0DMU9 189 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 MUC21Q5SSG8 566 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 NIT1Q86X76 327 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 EEF1AKMT3Q96AZ1 226 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 PAM16Q9Y3D7 125 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 USP24Q9UPU5 2620 aa14.89□□□□□ -0.03
PCDHA4-201ENST00000378125 GOSR1O95249 250 aa14.88□□□□□ -0.03
PCDHA4-201ENST00000378125 PMCHL1Q16048 86 aa14.88□□□□□ -0.03
PCDHA4-201ENST00000378125 C16orf54Q6UWD8 224 aa14.88□□□□□ -0.03
PCDHA4-201ENST00000378125 LURAP1LQ8IV03 231 aa14.88□□□□□ -0.03
PCDHA4-201ENST00000378125 CENPEQ02224 2701 aa14.88□□□□□ -0.03
PCDHA4-201ENST00000378125 HSBP1O75506 76 aa14.88□□□□□ -0.03
PCDHA4-201ENST00000378125 CLPSL1A2RUU4 121 aa14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 H3BUX3 64 aa14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 BUB3O43684 328 aa14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 ATP5G2Q06055 141 aa14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 ERCC8Q13216 396 aa14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 KLF5Q13887 457 aaPredicted RBP14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 C1orf194Q5T5A4 169 aa14.87□□□□□ -0.03
PCDHA4-201ENST00000378125 PRAC2D3DTV9 90 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 SH2D1AO60880 128 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 LCN12Q6JVE5 192 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 URB1-AS1Q96HZ7 61 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 ZNF462Q96JM2 2506 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 FAM231BA6NCW3 169 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 M0R2Z0 102 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 NDUFS8O00217 210 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 AVPP01185 164 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 TRGV3P03979 118 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 C3orf79P0CE67 100 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 Q8N976 141 aa14.86□□□□□ -0.03
PCDHA4-201ENST00000378125 A0A1B0GUT8 65 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 MSMBP08118 114 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 ZNF80P51504 273 aaPredicted RBP14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 ZNF138P52744 262 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 Q6ZS46 218 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 PRR25Q96S07 402 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 HIF1ANQ9NWT6 349 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 POLQO75417 2590 aa14.85□□□□□ -0.03
PCDHA4-201ENST00000378125 HAX1O00165 279 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 BLCAPP62952 87 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 TEX43Q6ZNM6 134 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 BORCS7Q96B45 105 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 NDUFAF3Q9BU61 184 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 LOC102724200A0A096LPH7 203 aaPredicted RBP14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 TRBV7-1A0A0A6YYK4 115 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 A1L4Q6 167 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 TRBV12-3P01733 135 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 LCNL1Q6ZST4 164 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 MAPK1IP1LQ8NDC0 245 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 BBC3Q96PG8 261 aaPredicted RBP14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 FAM208BQ5VWN6 2430 aa14.84□□□□□ -0.03
PCDHA4-201ENST00000378125 TMEM189A5PLL7 270 aa14.83□□□□□ -0.03
PCDHA4-201ENST00000378125 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.83□□□□□ -0.03
PCDHA4-201ENST00000378125 ATOH7Q8N100 152 aa14.83□□□□□ -0.03
PCDHA4-201ENST00000378125 MEGF9Q9H1U4 602 aa14.83□□□□□ -0.03
PCDHA4-201ENST00000378125 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.83□□□□□ -0.04
PCDHA4-201ENST00000378125 IGHV3-11P01762 117 aa14.83□□□□□ -0.04
PCDHA4-201ENST00000378125 CSN3P07498 182 aa14.83□□□□□ -0.04
PCDHA4-201ENST00000378125 FAM162BQ5T6X4 162 aa14.83□□□□□ -0.04
PCDHA4-201ENST00000378125 VAMP8Q9BV40 100 aa14.83□□□□□ -0.04
PCDHA4-201ENST00000378125 FBN2P35556 2912 aa14.83□□□□□ -0.04
PCDHA4-201ENST00000378125 KIR2DL5BA0A0G2JN68 375 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 KIR2DL5BA0A0G2JPC4 375 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 KLK9Q2XQG4 91 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 LYZL1Q6UWQ5 148 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 KIR2DL5AQ8N109 375 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 LINC00469Q8N7U9 141 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 KLK9Q9UKQ9 250 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 METTL26Q96S19 204 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 CLEC5AQ9NY25 188 aa14.82□□□□□ -0.04
PCDHA4-201ENST00000378125 TMEM213A2RRL7 107 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 RIGQ13278 110 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 SELENOKQ9Y6D0 94 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 SERTM2A0A1B0GWG4 89 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 FAM181BA6NEQ2 426 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 C19orf54Q5BKX5 351 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 SAPCD1Q5SSQ6 148 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 EBLN2Q6P2I7 272 aa14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 TIMM8BQ9Y5J9 83 aaPredicted RBP14.81□□□□□ -0.04
PCDHA4-201ENST00000378125 CSPG4Q6UVK1 2322 aa14.8□□□□□ -0.04
PCDHA4-201ENST00000378125 ARL3P36405 182 aa14.8□□□□□ -0.04
PCDHA4-201ENST00000378125 ZNF705AQ6ZN79 300 aaPredicted RBP14.8□□□□□ -0.04
PCDHA4-201ENST00000378125 KLK15Q9H2R5 256 aa14.8□□□□□ -0.04
PCDHA4-201ENST00000378125 S100A7P31151 101 aa14.8□□□□□ -0.04
PCDHA4-201ENST00000378125 TMEM190Q8WZ59 177 aa14.8□□□□□ -0.04
PCDHA4-201ENST00000378125 A0A1B0GV90 55 aa14.79□□□□□ -0.04
PCDHA4-201ENST00000378125 UNQ9165/PRO28630Q6UXU0 137 aa14.79□□□□□ -0.04
PCDHA4-201ENST00000378125 SPOCK3Q9BQ16 436 aa14.79□□□□□ -0.04
PCDHA4-201ENST00000378125 LRRK2Q5S007 2527 aa14.79□□□□□ -0.04
PCDHA4-201ENST00000378125 ZANQ9Y493 2812 aa14.79□□□□□ -0.04
PCDHA4-201ENST00000378125 EREGO14944 169 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms