RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TREML4Q6UXN2 200 aa8.77□□□□□ -1
HIF3A-205ENST00000377670 LHFPL1Q86WI0 220 aa8.77□□□□□ -1
HIF3A-205ENST00000377670 ATRXP46100 2492 aa8.77□□□□□ -1
HIF3A-205ENST00000377670 OVOL3O00110 214 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 DEFB131AP59861 70 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 OBSL1O75147 1896 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 NCR2O95944 276 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 RPL36AP83881 106 aaKnown RBP8.77□□□□□ -1.01
HIF3A-205ENST00000377670 KIR3DS1Q14943 382 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 RPL36ALQ969Q0 106 aaKnown RBP8.77□□□□□ -1.01
HIF3A-205ENST00000377670 PIEZO1Q92508 2521 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 RNF182Q8N6D2 247 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 DAZ1Q9NQZ3 744 aaKnown RBP8.77□□□□□ -1.01
HIF3A-205ENST00000377670 POLR3KQ9Y2Y1 108 aaPredicted RBP8.77□□□□□ -1.01
HIF3A-205ENST00000377670 CSPG4Q6UVK1 2322 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 PTPN13Q12923 2485 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 FCN3O75636 299 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
HIF3A-205ENST00000377670 MRPL52Q86TS9 123 aaKnown RBP8.77□□□□□ -1.01
HIF3A-205ENST00000377670 ZNRD1Q9P1U0 126 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 LTBP2Q14767 1821 aa8.77□□□□□ -1.01
HIF3A-205ENST00000377670 TRAV8-1A0A0A6YYK1 113 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 D6R8Y8 96 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 NDPQ00604 133 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 FAM120AOSQ5T036 256 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
HIF3A-205ENST00000377670 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 SLC25A20O43772 301 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 NPC2P61916 151 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 C10orf55Q5SWW7 151 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 SLC25A48Q6ZT89 311 aaKnown RBP8.76□□□□□ -1.01
HIF3A-205ENST00000377670 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 AGMATQ9BSE5 352 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 GGTLC1Q9BX51 225 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 OCIAD2Q56VL3 154 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 PRORYQ9H606 182 aa8.76□□□□□ -1.01
HIF3A-205ENST00000377670 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 NRGNQ92686 78 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 PRUNE2Q8WUY3 3088 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 PPBPP02775 128 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 ORMDL2Q53FV1 153 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 CHD7Q9P2D1 2997 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 UNC80Q8N2C7 3258 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 QRFPP83859 136 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 SNHG12Q9BXW3 62 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 ATXN8Q156A1 80 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 DLX4Q92988 240 aaPredicted RBP8.75□□□□□ -1.01
HIF3A-205ENST00000377670 MGST2Q99735 147 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 VPREB3Q9UKI3 123 aa8.75□□□□□ -1.01
HIF3A-205ENST00000377670 A0A1W2PNU3 283 aaPredicted RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 ADAMTSL5Q6ZMM2 481 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 IL17DQ8TAD2 202 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 C9JQL5 133 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 M0R2P5 195 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 PLNP26678 52 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 LAGE3Q14657 143 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 NPSP0C0P6 89 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 DEFB112Q30KQ8 113 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 CEP295Q9C0D2 2601 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 GHRHP01286 108 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 ZNF138P52744 262 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 RPL15P61313 204 aaKnown RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 DEFB104AQ8WTQ1 72 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 XCL2Q9UBD3 114 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 NPIPB5A8MRT5 1133 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 IGHV2-70P01814 119 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 RSPO1Q2MKA7 263 aaPredicted RBP8.74□□□□□ -1.01
HIF3A-205ENST00000377670 SMPXQ9UHP9 88 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 FAM215AQ9Y5M1 114 aa8.74□□□□□ -1.01
HIF3A-205ENST00000377670 IGHV3-73A0A0B4J1V6 119 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 CD28P10747 220 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 KLF17Q5JT82 389 aaPredicted RBP8.73□□□□□ -1.01
HIF3A-205ENST00000377670 Q8NFD4 153 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 RASL11AQ6T310 242 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 PSG3Q16557 428 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 C9orf139Q6ZV77 190 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 CYYR1Q96J86 154 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 MALRD1Q5VYJ5 2156 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 TRAV3A0A0B4J244 114 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 CD5LO43866 347 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 WISP2O76076 250 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 NMSQ5H8A3 153 aa8.73□□□□□ -1.01
HIF3A-205ENST00000377670 DUX4L9Q6RFH8 374 aaPredicted RBP8.73□□□□□ -1.01
HIF3A-205ENST00000377670 IGKV1D-17A0A075B6S4 117 aa8.72□□□□□ -1.01
HIF3A-205ENST00000377670 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
HIF3A-205ENST00000377670 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
HIF3A-205ENST00000377670 FAM90A2PQ658T7 463 aa8.72□□□□□ -1.01
HIF3A-205ENST00000377670 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms