RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SIX6O95475 246 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 OXA1LQ15070 435 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 LRRC37A5PQ49AS3 106 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-204ENST00000377349 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
CBWD3-204ENST00000377349 ZNF331Q9NQX6 463 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-204ENST00000377349 CXCL2P19875 107 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 S100A11P31949 105 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 B2MP61769 119 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 TMEM252Q8N6L7 170 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 OR10J6PQ8NGY7 276 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 C11orf1Q9H5F2 150 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 WDR83OSQ9Y284 106 aa13.55□□□□□ -0.24
CBWD3-204ENST00000377349 PFDN5Q99471 154 aa13.54□□□□□ -0.24
CBWD3-204ENST00000377349 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
CBWD3-204ENST00000377349 PXMP4Q9Y6I8 212 aa13.54□□□□□ -0.24
CBWD3-204ENST00000377349 PRAC2D3DTV9 90 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 H3BQ15 152 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 UPK1BO75841 260 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 AZU1P20160 251 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 CDKN1BP46527 198 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 FCN2Q15485 313 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 RNF212Q495C1 297 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 TMEM88Q6PEY1 159 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 KRTAP4-5Q9BYR2 181 aa13.53□□□□□ -0.24
CBWD3-204ENST00000377349 APOBP04114 4563 aaKnown RBP13.53□□□□□ -0.24
CBWD3-204ENST00000377349 ZNF575Q86XF7 245 aa13.52□□□□□ -0.25
CBWD3-204ENST00000377349 THAP6Q8TBB0 222 aa13.52□□□□□ -0.25
CBWD3-204ENST00000377349 RLN2P04090 185 aa13.51□□□□□ -0.25
CBWD3-204ENST00000377349 IGLC2P0DOY2 106 aa13.51□□□□□ -0.25
CBWD3-204ENST00000377349 LINC00299Q6ZSB3 139 aa13.51□□□□□ -0.25
CBWD3-204ENST00000377349 TMEM256Q8N2U0 113 aa13.51□□□□□ -0.25
CBWD3-204ENST00000377349 LYRM9A8MSI8 78 aa13.5□□□□□ -0.25
CBWD3-204ENST00000377349 RPL29P47914 159 aaKnown RBP13.5□□□□□ -0.25
CBWD3-204ENST00000377349 CLINT1Q14677 625 aa13.5□□□□□ -0.25
CBWD3-204ENST00000377349 KIR3DS1Q14943 382 aa13.5□□□□□ -0.25
CBWD3-204ENST00000377349 VWC2Q2TAL6 325 aa13.5□□□□□ -0.25
CBWD3-204ENST00000377349 F5H768 121 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 TAS2R60P59551 318 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 NHLH2Q02577 135 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 IL15RAQ13261 267 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 OR5C1Q8NGR4 320 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 BLNKQ8WV28 456 aa13.49□□□□□ -0.25
CBWD3-204ENST00000377349 INMT-MINDY4F8WBC2 141 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 TSPOP30536 169 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 GUK1Q16774 197 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 C16orf74Q96GX8 76 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 ZNF586Q9NXT0 402 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 PTTG2Q9NZH5 202 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 OR5AC2Q9NZP5 309 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 TIMM9Q9Y5J7 89 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 DNAH5Q8TE73 4624 aa13.48□□□□□ -0.25
CBWD3-204ENST00000377349 SSNA1O43805 119 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 PYYP10082 97 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 IFITM3Q01628 133 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 NOP10Q9NPE3 64 aaKnown RBP13.47□□□□□ -0.25
CBWD3-204ENST00000377349 E5RGE8 158 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 H7BYZ3 331 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 NUDT3O95989 172 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 C1orf134Q5TEV5 83 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 SAT2Q96F10 170 aaPredicted RBP13.47□□□□□ -0.25
CBWD3-204ENST00000377349 ATG101Q9BSB4 218 aa13.47□□□□□ -0.25
CBWD3-204ENST00000377349 TRAV12-3A0A0B4J271 114 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 PLAC8L1A1L4L8 177 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 A6NHS1 94 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 M0R3E3 92 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 PRAF2O60831 178 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 MPDU1O75352 247 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 LEPP41159 167 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 CCDC28AQ8IWP9 274 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 NMES1Q9C002 83 aa13.46□□□□□ -0.26
CBWD3-204ENST00000377349 TIMM8BQ9Y5J9 83 aaPredicted RBP13.46□□□□□ -0.26
CBWD3-204ENST00000377349 TRBV19A0A075B6N1 114 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 ATP5G1P05496 136 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 CT45A10P0DMU9 189 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 ATP5G3P48201 142 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 DEFA1P59665 94 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 DEFA3P59666 94 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 ERCC8Q13216 396 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 SOHLH1Q5JUK2 328 aa13.45□□□□□ -0.26
CBWD3-204ENST00000377349 TMEM263Q8WUH6 116 aaKnown RBP13.45□□□□□ -0.26
CBWD3-204ENST00000377349 EXOC3-AS1Q8N2X6 119 aa13.44□□□□□ -0.26
CBWD3-204ENST00000377349 C15orf53Q8NAA6 179 aa13.44□□□□□ -0.26
CBWD3-204ENST00000377349 NPIPB6E9PJ23 425 aa13.43□□□□□ -0.26
CBWD3-204ENST00000377349 FAM3BP58499 235 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-204ENST00000377349 CYCSP99999 105 aaKnown RBP13.43□□□□□ -0.26
CBWD3-204ENST00000377349 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
CBWD3-204ENST00000377349 SLC25A2Q9BXI2 301 aa13.43□□□□□ -0.26
CBWD3-204ENST00000377349 AAMDCQ9H7C9 122 aa13.43□□□□□ -0.26
CBWD3-204ENST00000377349 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 H0YIZ8 118 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 HIST1H1EP10412 219 aaKnown RBP13.42□□□□□ -0.26
CBWD3-204ENST00000377349 TNP2Q05952 138 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 FAM122CQ6P4D5 195 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms