RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
HDAC6-202ENST00000376610 SLC17A3O00476 420 aa12.89□□□□□ -0.35
HDAC6-202ENST00000376610 CAV2P51636 162 aa12.89□□□□□ -0.35
HDAC6-202ENST00000376610 ARL16Q0P5N6 197 aa12.89□□□□□ -0.35
HDAC6-202ENST00000376610 OR1L4Q8NGR5 311 aa12.89□□□□□ -0.35
HDAC6-202ENST00000376610 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-202ENST00000376610 RBM38Q9H0Z9 239 aaKnown RBP12.89□□□□□ -0.35
HDAC6-202ENST00000376610 Q9H8V8 135 aa12.89□□□□□ -0.35
HDAC6-202ENST00000376610 LSM5Q9Y4Y9 91 aaKnown RBP12.89□□□□□ -0.35
HDAC6-202ENST00000376610 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 J3KRW8 73 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 GAGE7O76087 117 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 IGLC2P0DOY2 106 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 BTCP35070 178 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 RXFP4Q8TDU9 374 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 PFDN5Q99471 154 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 HSPG2P98160 4391 aa12.88□□□□□ -0.35
HDAC6-202ENST00000376610 A0A0J9YY99 117 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 CDK2AP2O75956 126 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 PVALBP20472 110 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-202ENST00000376610 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 LINC00612Q8N6U2 182 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 ODF3Q96PU9 254 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 C20orf85Q9H1P6 137 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
HDAC6-202ENST00000376610 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
HDAC6-202ENST00000376610 H3BQ15 152 aa12.86□□□□□ -0.35
HDAC6-202ENST00000376610 CCSO14618 274 aa12.86□□□□□ -0.35
HDAC6-202ENST00000376610 IL7P13232 177 aa12.86□□□□□ -0.35
HDAC6-202ENST00000376610 MORN5Q5VZ52 161 aa12.86□□□□□ -0.35
HDAC6-202ENST00000376610 C12orf45Q8N5I9 185 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-202ENST00000376610 SAT2Q96F10 170 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-202ENST00000376610 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
HDAC6-202ENST00000376610 C5orf51A6NDU8 294 aa12.85□□□□□ -0.35
HDAC6-202ENST00000376610 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
HDAC6-202ENST00000376610 H3BNG1 76 aa12.85□□□□□ -0.35
HDAC6-202ENST00000376610 CST7O76096 145 aa12.85□□□□□ -0.35
HDAC6-202ENST00000376610 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
HDAC6-202ENST00000376610 MIC13Q5XKP0 118 aa12.85□□□□□ -0.35
HDAC6-202ENST00000376610 SDHCQ99643 169 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-202ENST00000376610 ZNF253O75346 499 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 HOXA5P20719 270 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 BAXQ07812 192 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 MAPKAPK5-AS1Q8N8E1 139 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 UPK3BQ9BT76 320 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 Q9H3A6 140 aa12.84□□□□□ -0.35
HDAC6-202ENST00000376610 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 TRAV5A0A0B4J249 113 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 A0A1W2PPQ1 181 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 SLC25A5P05141 298 aaKnown RBP12.83□□□□□ -0.36
HDAC6-202ENST00000376610 HBG1P69891 147 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 HBG2P69892 147 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
HDAC6-202ENST00000376610 SPATA12Q7Z6I5 190 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 STX12Q86Y82 276 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 ZNF431Q8TF32 576 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-202ENST00000376610 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
HDAC6-202ENST00000376610 SLC39A9Q9NUM3 307 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 WDR83OSQ9Y284 106 aa12.83□□□□□ -0.36
HDAC6-202ENST00000376610 UBE2L5PA0A1B0GUS4 154 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 FAM24AA6NFZ4 105 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 LYRM1O43325 122 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 S100A11P31949 105 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 RPL29P47914 159 aaKnown RBP12.82□□□□□ -0.36
HDAC6-202ENST00000376610 S100A10P60903 97 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 KRTAP4-5Q9BYR2 181 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 TMPRSS5Q9H3S3 457 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 ZNF586Q9NXT0 402 aa12.82□□□□□ -0.36
HDAC6-202ENST00000376610 MRPS16Q9Y3D3 137 aaKnown RBP12.82□□□□□ -0.36
HDAC6-202ENST00000376610 TRAV6A0A075B6T7 132 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 C7orf71A4D174 169 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 TCRBP04435 133 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 BTF3P20290 206 aaKnown RBP12.81□□□□□ -0.36
HDAC6-202ENST00000376610 SULT1A1P50225 295 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 ESRGQ1W209 222 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 Q6ZTI0 123 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 C2orf50Q96LR7 162 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
HDAC6-202ENST00000376610 TRBV19A0A075B6N1 114 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 PDE6HQ13956 83 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 VWC2Q2TAL6 325 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 LINC00477Q96M19 166 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 GSN-AS1Q9NRJ2 163 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 LYRM2Q9NU23 88 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-202ENST00000376610 NUDT15Q9NV35 164 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 DNAH5Q8TE73 4624 aa12.8□□□□□ -0.36
HDAC6-202ENST00000376610 TRGV1A0A0A0MS02 117 aa12.79□□□□□ -0.36
HDAC6-202ENST00000376610 HIST1H1EP10412 219 aaKnown RBP12.79□□□□□ -0.36
HDAC6-202ENST00000376610 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
HDAC6-202ENST00000376610 SEC22CQ9BRL7 303 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms