RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.05
PDPN-202ENST00000376057 TRAV8-2A0A0B4J237 113 aa8.46□□□□□ -1.06
PDPN-202ENST00000376057 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
PDPN-202ENST00000376057 C8orf86Q6ZUL3 223 aa8.46□□□□□ -1.06
PDPN-202ENST00000376057 DUX5Q96PT3 197 aa8.46□□□□□ -1.06
PDPN-202ENST00000376057 IL36BQ9NZH7 164 aa8.46□□□□□ -1.06
PDPN-202ENST00000376057 MAP1AP78559 2803 aaPredicted RBP8.46□□□□□ -1.06
PDPN-202ENST00000376057 C19orf71A6NCJ1 209 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 H3BTX0 84 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 SAPCD1Q5SSQ6 148 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 LCN12Q6JVE5 192 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 GOLT1AQ6ZVE7 132 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 SMR3AQ99954 134 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 RHPN1-AS1Q9BWJ2 59 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 IGHV4OR15-8A0A075B7B6 117 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 A0A087WW49 117 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 TMEM213A2RRL7 107 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 LINC01619G3V211 115 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 LINC01006Q8NI28 216 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
PDPN-202ENST00000376057 TRAV34A0A0B4J273 112 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 ERVFC1-1P60608 527 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 IBA57Q5T440 356 aaKnown RBP8.44□□□□□ -1.06
PDPN-202ENST00000376057 OR4B1Q8NGF8 309 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 NRN1Q9NPD7 142 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 IGHV3OR16-8A0A075B7F1 116 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 TRAV2A0A0B4J234 112 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 ZNF320A2RRD8 509 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 HOXD3P31249 432 aaPredicted RBP8.44□□□□□ -1.06
PDPN-202ENST00000376057 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
PDPN-202ENST00000376057 FHL3Q13643 280 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 TM4SF20Q53R12 229 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 TRBV7-9A0A0J9YWB2 115 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 ZNF207O43670 478 aaKnown RBP8.44□□□□□ -1.06
PDPN-202ENST00000376057 GATCO43716 136 aaKnown RBP8.44□□□□□ -1.06
PDPN-202ENST00000376057 SNRPCP09234 159 aaKnown RBP8.44□□□□□ -1.06
PDPN-202ENST00000376057 C9orf47Q6ZRZ4 202 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 GFRA4Q9GZZ7 299 aa8.44□□□□□ -1.06
PDPN-202ENST00000376057 CRLF1O75462 422 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 CXCL1P09341 107 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 OR5I1Q13606 314 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 OR1N2Q8NGR9 330 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 SRD5A3Q9H8P0 318 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 A0A1B0GUS0 222 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 OVOL1O14753 267 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 TCF21O43680 179 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 PEMTQ9UBM1 199 aa8.43□□□□□ -1.06
PDPN-202ENST00000376057 TSSC4Q9Y5U2 329 aaPredicted RBP8.43□□□□□ -1.06
PDPN-202ENST00000376057 TGIF2-C20orf24A0A0A6YYL0 155 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 M0R3E3 92 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 COX19Q49B96 90 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 NUDT10Q8NFP7 164 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 NUDT11Q96G61 164 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 AURKAIP1Q9NWT8 199 aaPredicted RBP8.42□□□□□ -1.06
PDPN-202ENST00000376057 SIGLEC8Q9NYZ4 499 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 MGST1P10620 155 aaKnown RBP8.42□□□□□ -1.06
PDPN-202ENST00000376057 PROK1P58294 105 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 FAM3BP58499 235 aaPredicted RBP8.42□□□□□ -1.06
PDPN-202ENST00000376057 RASL11AQ6T310 242 aa8.42□□□□□ -1.06
PDPN-202ENST00000376057 IGHV3-66A0A0C4DH42 116 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 CBLN1P23435 193 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 RPL19P84098 196 aaKnown RBP8.41□□□□□ -1.06
PDPN-202ENST00000376057 PRNTQ86SH4 94 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 C16orf92Q96LL3 132 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 PRR25Q96S07 402 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 FASNP49327 2511 aaKnown RBP8.41□□□□□ -1.06
PDPN-202ENST00000376057 ID1P41134 155 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
PDPN-202ENST00000376057 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
PDPN-202ENST00000376057 RNASE7Q9H1E1 156 aaKnown RBP8.41□□□□□ -1.06
PDPN-202ENST00000376057 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 TCF24Q7RTU0 167 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 LINC00477Q96M19 166 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
PDPN-202ENST00000376057 URGCP-MRPS24S4R325 110 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 TRAV8-1A0A0A6YYK1 113 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 INAFM1C9JVW0 142 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 PHOX2AO14813 284 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 SYNJ2BPP57105 145 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 RAB5BP61020 215 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 GBGT1Q8N5D6 347 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 OR11H1Q8NG94 326 aa8.4□□□□□ -1.06
PDPN-202ENST00000376057 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 ZNF705GA8MUZ8 300 aaPredicted RBP8.39□□□□□ -1.07
PDPN-202ENST00000376057 M0QZ24 198 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 KLHL30-AS1Q8NEE0 82 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 OR9G4Q8NGQ1 327 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms