RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 A0A1B0GXF2 115 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 GNG7O60262 68 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 TCRAP04437 139 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 LINC00322Q6ZN03 302 aaPredicted RBP10.95□□□□□ -0.66
MSH5-202ENST00000375740 SHANK2-AS3Q9BTD1 123 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 C7orf69Q9H7B7 122 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
MSH5-202ENST00000375740 MFAP4P55083 255 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 GPR82Q96P67 336 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
MSH5-202ENST00000375740 IL4P05112 153 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 FAM106CPP0CH98 169 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 Q8N9W7 124 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 OTORQ9NRC9 128 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 C1RLQ9NZP8 487 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 IGHV7-81A0A0B4J1V7 117 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 WI2-2373I1.2A0A1W2PRP0 233 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 H3BUT2 72 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 IGHV4-39P01824 125 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 C17orf77Q96MU5 243 aa10.94□□□□□ -0.66
MSH5-202ENST00000375740 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
MSH5-202ENST00000375740 H3BRN7 92 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 CSN3P07498 182 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 FCGR2BP31994 310 aaPredicted RBP10.93□□□□□ -0.66
MSH5-202ENST00000375740 BCL6BQ8N143 479 aaPredicted RBP10.93□□□□□ -0.66
MSH5-202ENST00000375740 FMC1Q96HJ9 113 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 NCR2O95944 276 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 IGHV3-23P01764 117 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 SAA4P35542 130 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 BPIFA4PQ86YQ2 179 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
MSH5-202ENST00000375740 TMEM97Q5BJF2 176 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 PGLYRP4Q96LB8 373 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 CLUHP3Q96NS8 147 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 C21orf62Q9NYP8 219 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 LTAP01374 205 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 HLA-DRB1P01911 266 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 TRBV19A0A075B6N1 114 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 ZNF48Q96MX3 618 aaPredicted RBP10.92□□□□□ -0.66
MSH5-202ENST00000375740 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 THYN1Q9P016 225 aa10.92□□□□□ -0.66
MSH5-202ENST00000375740 TRAV8-1A0A0A6YYK1 113 aa10.91□□□□□ -0.66
MSH5-202ENST00000375740 COX8AP10176 69 aa10.91□□□□□ -0.66
MSH5-202ENST00000375740 HBBP68871 147 aa10.91□□□□□ -0.66
MSH5-202ENST00000375740 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
MSH5-202ENST00000375740 ASH1LQ9NR48 2969 aaKnown RBP10.91□□□□□ -0.66
MSH5-202ENST00000375740 PKD1L2Q7Z442 2459 aa10.91□□□□□ -0.66
MSH5-202ENST00000375740 GOLT1AQ6ZVE7 132 aa10.91□□□□□ -0.66
MSH5-202ENST00000375740 NPFFO15130 113 aa10.9□□□□□ -0.66
MSH5-202ENST00000375740 MRPS12O15235 138 aaKnown RBP10.9□□□□□ -0.66
MSH5-202ENST00000375740 NEGR1Q7Z3B1 354 aa10.9□□□□□ -0.66
MSH5-202ENST00000375740 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
MSH5-202ENST00000375740 CENPVL3A0A0U1RRI6 287 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 C9orf118A6NHY6 69 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 IGLV2-11P01706 119 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 PET117Q6UWS5 81 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 Q71RC1 249 aaPredicted RBP10.9□□□□□ -0.67
MSH5-202ENST00000375740 ZNF414Q96IQ9 312 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 RABAC1Q9UI14 185 aa10.9□□□□□ -0.67
MSH5-202ENST00000375740 PRB4P10163 310 aaPredicted RBP10.89□□□□□ -0.67
MSH5-202ENST00000375740 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 PRSS22Q9GZN4 317 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 CSMD1Q96PZ7 3565 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 C19orf71A6NCJ1 209 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 K7EP34 96 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 CTSGP08311 255 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 FGF6P10767 208 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 Q5PR19 223 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 LINC01545Q5VT33 79 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 SIGLEC15Q6ZMC9 328 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 Q86TA4 180 aa10.89□□□□□ -0.67
MSH5-202ENST00000375740 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
MSH5-202ENST00000375740 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
MSH5-202ENST00000375740 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 OR2K2Q8NGT1 345 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 IGHV3OR16-10A0A075B7F0 116 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 LINC01548A6NM66 108 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 ATP6V0E1O15342 81 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 ZNF207O43670 478 aaKnown RBP10.88□□□□□ -0.67
MSH5-202ENST00000375740 KIR3DS1Q14943 382 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 ECSCRQ19T08 205 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 OR10AG1Q8NH19 301 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 DAZAP1Q96EP5 407 aaKnown RBP10.88□□□□□ -0.67
MSH5-202ENST00000375740 AP1S3Q96PC3 154 aa10.88□□□□□ -0.67
MSH5-202ENST00000375740 A0A0G2JLM5 398 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 TMEM8BA6NDV4 472 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 P01737 135 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 SEC11AP67812 179 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 PAX8Q06710 450 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms