RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PGPA6NDG6 321 aa9.69□□□□□ -0.86
C9orf3-203ENST00000375315 CRYGCP07315 174 aa9.69□□□□□ -0.86
C9orf3-203ENST00000375315 CEND1Q8N111 149 aa9.69□□□□□ -0.86
C9orf3-203ENST00000375315 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
C9orf3-203ENST00000375315 TM2D2Q9BX73 214 aa9.69□□□□□ -0.86
C9orf3-203ENST00000375315 IFI27P40305 119 aaPredicted RBP9.68□□□□□ -0.86
C9orf3-203ENST00000375315 ADIPOQQ15848 244 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 RPL39P5Q59GN2 51 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 SLC25A48Q6ZT89 311 aaKnown RBP9.68□□□□□ -0.86
C9orf3-203ENST00000375315 PRNDQ9UKY0 176 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 A0A096LNJ9 63 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 HBDP02042 147 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 FOXI1Q12951 378 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 PIFOQ8TCI5 191 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 FXYD5Q96DB9 178 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 CDIP1Q9H305 208 aa9.68□□□□□ -0.86
C9orf3-203ENST00000375315 A0A1B0GW15 77 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 LTAP01374 205 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 IGHV1-46P01743 117 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 MYCNOSP40205 109 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 PRB3Q04118 309 aaPredicted RBP9.67□□□□□ -0.86
C9orf3-203ENST00000375315 ATP6V0E2Q8NHE4 81 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 FAM110AQ9BQ89 295 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 ARFGEF3Q5TH69 2177 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 CD69Q07108 199 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 C2orf83Q53S99 150 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
C9orf3-203ENST00000375315 AMTNQ6UX39 209 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 Q6ZUT4 128 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 CCL13Q99616 98 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 C1QTNF4Q9BXJ3 329 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 PRO0461Q9UI25 63 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 HRNRQ86YZ3 2850 aaPredicted RBP9.67□□□□□ -0.86
C9orf3-203ENST00000375315 TRBV7-9A0A0J9YWB2 115 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 LOC389332A0A1B0GUA5 103 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 E7EQL1 145 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 SSBP2P81877 361 aaPredicted RBP9.67□□□□□ -0.86
C9orf3-203ENST00000375315 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 LEAP2Q969E1 77 aa9.67□□□□□ -0.86
C9orf3-203ENST00000375315 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 ARHGAP32A7KAX9 2087 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 FAM106CPP0CH98 169 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 HERV-K104P63124 156 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 PRCDQ00LT1 54 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 SRSF1Q07955 248 aaKnown RBP eCLIP9.66□□□□□ -0.866e-7■■■□□ 17.9
C9orf3-203ENST00000375315 LOXL1Q08397 574 aaPredicted RBP9.66□□□□□ -0.86
C9orf3-203ENST00000375315 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 CD177Q8N6Q3 437 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 C15orf65H3BRN8 121 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 CD3EP07766 207 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 MYOD1P15172 320 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 PRDX2P32119 198 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 MLANAQ16655 118 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 CACNG8Q8WXS5 425 aa9.66□□□□□ -0.86
C9orf3-203ENST00000375315 FAM216BQ8N7L0 139 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 GATD1Q8NB37 220 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 B5MCH6 92 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 OR1L8Q8NGR8 309 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 NGBQ9NPG2 151 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 DSCAMO60469 2012 aa9.65□□□□□ -0.86
C9orf3-203ENST00000375315 ABCA12Q86UK0 2595 aa9.65□□□□□ -0.87
C9orf3-203ENST00000375315 SHISA9B4DS77 424 aa9.65□□□□□ -0.87
C9orf3-203ENST00000375315 C12orf74Q32Q52 190 aa9.65□□□□□ -0.87
C9orf3-203ENST00000375315 DDB2Q92466 427 aa9.65□□□□□ -0.87
C9orf3-203ENST00000375315 DYSFO75923 2080 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 XGP55808 180 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 RRN3P1Q2M238 152 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 OSR1Q8TAX0 266 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-203ENST00000375315 VCX2Q9H322 139 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 DKK2Q9UBU2 259 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 IGKV1D-17A0A075B6S4 117 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 TAL2Q16559 108 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 C8orf46Q8TAG6 207 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 UFC1Q9Y3C8 167 aa9.64□□□□□ -0.87
C9orf3-203ENST00000375315 NPIPB5A8MRT5 1133 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 NDUFS7O75251 213 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 ZFAND6Q6FIF0 208 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 VSTM5A8MXK1 200 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 TCRAP04437 139 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 RNASE2P10153 161 aaKnown RBP9.63□□□□□ -0.87
C9orf3-203ENST00000375315 PATE2Q6UY27 113 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 LINC00305Q7Z4B0 112 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 FAM90A1Q86YD7 464 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 SRSF12Q8WXF0 261 aaKnown RBP9.63□□□□□ -0.87
C9orf3-203ENST00000375315 RNASE6Q93091 150 aaKnown RBP9.63□□□□□ -0.87
C9orf3-203ENST00000375315 PTPN13Q12923 2485 aa9.63□□□□□ -0.87
C9orf3-203ENST00000375315 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 DLX1P56177 255 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 UTF1Q5T230 341 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 IGLV3-9A0A075B6K5 115 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 C17orf100A8MU93 164 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 D6R8Y8 96 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 PPIFP30405 207 aaKnown RBP9.62□□□□□ -0.87
C9orf3-203ENST00000375315 CFHR2P36980 270 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms