RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 MRPL18Q9H0U6 180 aaKnown RBP9.61□□□□□ -0.87
PRPF4-202ENST00000374199 AAMDCQ9H7C9 122 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
PRPF4-202ENST00000374199 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 A0A0G2JLM5 398 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 CBLN1P23435 193 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 Q96MF0 132 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 MS4A10Q96PG2 267 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 CENPEQ02224 2701 aa9.61□□□□□ -0.87
PRPF4-202ENST00000374199 ZANQ9Y493 2812 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 J3QKU1 62 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 K7EQM0 130 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 M0R3E3 92 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 CHEK1O14757 476 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 HLA-DQA1P01909 254 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 CIARTQ8N365 385 aaPredicted RBP9.6□□□□□ -0.87
PRPF4-202ENST00000374199 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 METTL26Q96S19 204 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 XKRY2A2RUG3 117 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 CA1P00915 261 aaPredicted RBP9.6□□□□□ -0.87
PRPF4-202ENST00000374199 ARL3P36405 182 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 HAX1O00165 279 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 AMBPP02760 352 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 TPPP2P59282 170 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 KLF5Q13887 457 aaPredicted RBP9.6□□□□□ -0.87
PRPF4-202ENST00000374199 OR10J3Q5JRS4 329 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 UNQ9165/PRO28630Q6UXU0 137 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 PRR25Q96S07 402 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 GPR61Q9BZJ8 451 aa9.6□□□□□ -0.87
PRPF4-202ENST00000374199 LRRK2Q5S007 2527 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 A8MWL6 223 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 FOXE3Q13461 319 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 C9orf47Q6ZRZ4 202 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 FOXC2Q99958 501 aa9.59□□□□□ -0.87
PRPF4-202ENST00000374199 RPL19P84098 196 aaKnown RBP9.58□□□□□ -0.88
PRPF4-202ENST00000374199 PYY3Q5JQD4 70 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 SAPCD1Q5SSQ6 148 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 LINC00527Q9UJ94 153 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 A8MWP6 167 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 P01737 135 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 PDZD11Q5EBL8 140 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 RBPMS2Q6ZRY4 209 aaKnown RBP9.58□□□□□ -0.88
PRPF4-202ENST00000374199 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 CNFNQ9BYD5 112 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 C8orf86Q6ZUL3 223 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 OR4X2Q8NGF9 303 aa9.58□□□□□ -0.88
PRPF4-202ENST00000374199 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 SNURFLB1AK76 121 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 SMAD7O15105 426 aaKnown RBP9.57□□□□□ -0.88
PRPF4-202ENST00000374199 Q6AWC8 147 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 REC114Q7Z4M0 266 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 MAPK1IP1LQ8NDC0 245 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 SGK494Q96LW2 274 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 ZNF493Q6ZR52 646 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 TEX29Q8N6K0 151 aa9.57□□□□□ -0.88
PRPF4-202ENST00000374199 CSN1S1P47710 185 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 SLAQ13239 276 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 C8orf49Q96NF6 230 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 VGLL1Q99990 258 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 LENEPQ9Y5L5 61 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 LGALS9O00182 355 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 ELANEP08246 267 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 CUBNO60494 3623 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 IGHV7-4-1A0A0J9YVY3 117 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 A0A1B0GW15 77 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 NUPR1O60356 82 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 CTRLP40313 264 aa9.56□□□□□ -0.88
PRPF4-202ENST00000374199 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
PRPF4-202ENST00000374199 TRBV7-9A0A0J9YWB2 115 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 PRAC2D3DTV9 90 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
PRPF4-202ENST00000374199 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 HLA-DMBP28068 263 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 S100A2P29034 98 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 SERTAD4Q9NUC0 356 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
PRPF4-202ENST00000374199 RPH3ALQ9UNE2 315 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 TCL1AP56279 114 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 DEFA6Q01524 100 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 FAM162BQ5T6X4 162 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 OR10D4PQ8NGN7 298 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 MED13LQ71F56 2210 aa9.55□□□□□ -0.88
PRPF4-202ENST00000374199 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-202ENST00000374199 HBBP68871 147 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 JOSD1Q15040 202 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-202ENST00000374199 TMEM95Q3KNT9 176 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 PRR27Q6MZM9 219 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 NPFFR1Q9GZQ6 430 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 GNB4Q9HAV0 340 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms