RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ZNF705FA8MVS1 300 aaPredicted RBP12.06□□□□□ -0.48
TMEM53-203ENST00000372242 CXorf1O96002 111 aa12.06□□□□□ -0.48
TMEM53-203ENST00000372242 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
TMEM53-203ENST00000372242 RANP62826 216 aaKnown RBP12.06□□□□□ -0.48
TMEM53-203ENST00000372242 PDE6HQ13956 83 aa12.06□□□□□ -0.48
TMEM53-203ENST00000372242 PSG3Q16557 428 aa12.06□□□□□ -0.48
TMEM53-203ENST00000372242 FAM74A1Q5RGS3 127 aa12.06□□□□□ -0.48
TMEM53-203ENST00000372242 ZNF738Q8NE65 137 aa12.06□□□□□ -0.48
TMEM53-203ENST00000372242 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
TMEM53-203ENST00000372242 ZNF253O75346 499 aa12.05□□□□□ -0.48
TMEM53-203ENST00000372242 ZNF705DP0CH99 300 aaPredicted RBP12.05□□□□□ -0.48
TMEM53-203ENST00000372242 ZNF705BP0CI00 300 aaPredicted RBP12.05□□□□□ -0.48
TMEM53-203ENST00000372242 GCHFRP30047 84 aa12.05□□□□□ -0.48
TMEM53-203ENST00000372242 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
TMEM53-203ENST00000372242 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
TMEM53-203ENST00000372242 M0R3E3 92 aa12.04□□□□□ -0.48
TMEM53-203ENST00000372242 PSG9Q00887 426 aa12.04□□□□□ -0.48
TMEM53-203ENST00000372242 STHQ8IWL8 128 aa12.04□□□□□ -0.48
TMEM53-203ENST00000372242 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
TMEM53-203ENST00000372242 ICAM4Q14773 271 aa12.04□□□□□ -0.48
TMEM53-203ENST00000372242 LINC00322Q6ZN03 302 aaPredicted RBP12.04□□□□□ -0.48
TMEM53-203ENST00000372242 SFT2D1Q8WV19 159 aa12.04□□□□□ -0.48
TMEM53-203ENST00000372242 RPUSD4Q96CM3 377 aaKnown RBP12.04□□□□□ -0.48
TMEM53-203ENST00000372242 SAV1Q9H4B6 383 aaPredicted RBP12.04□□□□□ -0.48
TMEM53-203ENST00000372242 LOC102724200A0A096LPH7 203 aaPredicted RBP12.03□□□□□ -0.48
TMEM53-203ENST00000372242 A0A1B0GV50 99 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 PRAC2D3DTV9 90 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 H3BMM0 161 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 IGKV3-20P01619 116 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 SULT1A2P50226 295 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 ASCL2Q99929 193 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 Q9H3A6 140 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 AAMDCQ9H7C9 122 aa12.03□□□□□ -0.48
TMEM53-203ENST00000372242 A0A0J9YX75 114 aa12.02□□□□□ -0.48
TMEM53-203ENST00000372242 HLA-DRB4P13762 266 aa12.02□□□□□ -0.48
TMEM53-203ENST00000372242 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.48
TMEM53-203ENST00000372242 TRPT1Q86TN4 253 aaKnown RBP12.02□□□□□ -0.48
TMEM53-203ENST00000372242 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.48
TMEM53-203ENST00000372242 HLA-DRB4X5D2U9 266 aa12.02□□□□□ -0.48
TMEM53-203ENST00000372242 H2AFB1P0C5Y9 115 aa12.02□□□□□ -0.49
TMEM53-203ENST00000372242 RAB5CP51148 216 aa12.02□□□□□ -0.49
TMEM53-203ENST00000372242 OR4B1Q8NGF8 309 aa12.02□□□□□ -0.49
TMEM53-203ENST00000372242 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
TMEM53-203ENST00000372242 HAGHQ16775 308 aa12.01□□□□□ -0.49
TMEM53-203ENST00000372242 TMEM167BQ9NRX6 74 aa12.01□□□□□ -0.49
TMEM53-203ENST00000372242 CLEC5AQ9NY25 188 aa12.01□□□□□ -0.49
TMEM53-203ENST00000372242 PGPA6NDG6 321 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
TMEM53-203ENST00000372242 LYPD1Q8N2G4 141 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 OR8A1Q8NGG7 326 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 B9D2Q9BPU9 175 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 NBEAL2Q6ZNJ1 2754 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 CNN1P51911 297 aaKnown RBP12□□□□□ -0.49
TMEM53-203ENST00000372242 UBE2G2P60604 165 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 PRKDCP78527 4128 aaKnown RBP12□□□□□ -0.49
TMEM53-203ENST00000372242 BTN1A1Q13410 526 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 UQCC3Q6UW78 93 aa12□□□□□ -0.49
TMEM53-203ENST00000372242 ZNF705EA8MWA4 302 aaPredicted RBP11.99□□□□□ -0.49
TMEM53-203ENST00000372242 OTORQ9NRC9 128 aa11.99□□□□□ -0.49
TMEM53-203ENST00000372242 RAB19A4D1S5 217 aa11.98□□□□□ -0.49
TMEM53-203ENST00000372242 MRPL53Q96EL3 112 aaKnown RBP11.98□□□□□ -0.49
TMEM53-203ENST00000372242 CSTL1Q9H114 145 aa11.98□□□□□ -0.49
TMEM53-203ENST00000372242 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
TMEM53-203ENST00000372242 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
TMEM53-203ENST00000372242 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
TMEM53-203ENST00000372242 APOC4P55056 127 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 FXYD7P58549 80 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 SUMO1P63165 101 aaKnown RBP11.97□□□□□ -0.49
TMEM53-203ENST00000372242 CCL20P78556 96 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 OR10J6PQ8NGY7 276 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 SLC35B3Q9H1N7 401 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 RPH3ALQ9UNE2 315 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 COL7A1Q02388 2944 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 KIR2DL5BA0A0G2JN68 375 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 KIR2DL5BA0A0G2JPC4 375 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 GGTLC3B5MD39 225 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 DUSP14O95147 198 aaKnown RBP11.97□□□□□ -0.49
TMEM53-203ENST00000372242 CA1P00915 261 aaPredicted RBP11.97□□□□□ -0.49
TMEM53-203ENST00000372242 ERCC8Q13216 396 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 KIR2DL5AQ8N109 375 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
TMEM53-203ENST00000372242 SLC25A5P05141 298 aaKnown RBP11.96□□□□□ -0.49
TMEM53-203ENST00000372242 GIG44P09565 113 aaPredicted RBP11.96□□□□□ -0.49
TMEM53-203ENST00000372242 CSN1S1P47710 185 aa11.96□□□□□ -0.49
TMEM53-203ENST00000372242 GNG5P63218 68 aa11.96□□□□□ -0.49
TMEM53-203ENST00000372242 AMTNQ6UX39 209 aa11.96□□□□□ -0.49
TMEM53-203ENST00000372242 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
TMEM53-203ENST00000372242 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 FAM74A7A6NL05 159 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 VGLL1Q99990 258 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 RETNQ9HD89 108 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 A8MTW9 85 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 PAGE4O60829 102 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 NUTF2P61970 127 aaKnown RBP11.95□□□□□ -0.5
TMEM53-203ENST00000372242 DEFB135Q30KP9 77 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 RXFP4Q8TDU9 374 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms