RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 NPSP0C0P6 89 aa19.24■□□□□ 0.67
RAPGEF1-203ENST00000372195 RNF223E7ERA6 249 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 TCF15Q12870 199 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 TMEM75Q8N9X5 138 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 OOSP1A8MZH6 123 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 IGHG3P01860 377 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 Q6ZR03 302 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 TMEM14BQ9NUH8 114 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 DIAPH2-AS1Q14236 149 aa19.23■□□□□ 0.67
RAPGEF1-203ENST00000372195 IGKV1-39P01597 117 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 IGKV1D-39P04432 117 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 HAPLN4Q86UW8 402 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 ZNF114Q8NC26 417 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 DAZ1Q9NQZ3 744 aaKnown RBP19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 GHRHP01286 108 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 Q6ZWC4 215 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 GAGE12JA6NER3 117 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 GAGE1Q13065 139 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 GAGE4Q13068 117 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 GAGE5Q13069 117 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 C17orf58Q2M2W7 97 aa19.22■□□□□ 0.67
RAPGEF1-203ENST00000372195 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.21■□□□□ 0.67
RAPGEF1-203ENST00000372195 SLAQ13239 276 aa19.21■□□□□ 0.67
RAPGEF1-203ENST00000372195 GFRA4Q9GZZ7 299 aa19.21■□□□□ 0.67
RAPGEF1-203ENST00000372195 NDUFA4L2Q9NRX3 87 aa19.21■□□□□ 0.67
RAPGEF1-203ENST00000372195 LINC01559Q495D7 138 aa19.21■□□□□ 0.67
RAPGEF1-203ENST00000372195 MYMXA0A1B0GTQ4 84 aa19.21■□□□□ 0.67
RAPGEF1-203ENST00000372195 IGFBPL1Q8WX77 278 aa19.2■□□□□ 0.66
RAPGEF1-203ENST00000372195 CITED2Q99967 270 aaPredicted RBP19.2■□□□□ 0.66
RAPGEF1-203ENST00000372195 FNDC1Q4ZHG4 1894 aaPredicted RBP19.2■□□□□ 0.66
RAPGEF1-203ENST00000372195 TEX36Q5VZQ5 186 aa19.2■□□□□ 0.66
RAPGEF1-203ENST00000372195 PROK2Q9HC23 129 aa19.2■□□□□ 0.66
RAPGEF1-203ENST00000372195 PSCAO43653 123 aa19.19■□□□□ 0.66
RAPGEF1-203ENST00000372195 Q0VG73 95 aa19.19■□□□□ 0.66
RAPGEF1-203ENST00000372195 LINC01356Q8N9X3 169 aa19.19■□□□□ 0.66
RAPGEF1-203ENST00000372195 SLC25A16P16260 332 aa19.19■□□□□ 0.66
RAPGEF1-203ENST00000372195 Q6ZS92 163 aa19.19■□□□□ 0.66
RAPGEF1-203ENST00000372195 PFN1P07737 140 aaKnown RBP19.18■□□□□ 0.66
RAPGEF1-203ENST00000372195 WIPF3A6NGB9 483 aa19.18■□□□□ 0.66
RAPGEF1-203ENST00000372195 IGHV1-24A0A0C4DH33 117 aa19.18■□□□□ 0.66
RAPGEF1-203ENST00000372195 MRPL51Q4U2R6 128 aaKnown RBP19.18■□□□□ 0.66
RAPGEF1-203ENST00000372195 LINC01549A6NIU2 74 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 VWC2LB2RUY7 222 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 ARTNQ5T4W7 220 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 FANCMQ8IYD8 2048 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 TICRRQ7Z2Z1 1910 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 LY6G5BQ8NDX9 201 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 HELZP42694 1942 aaKnown RBP19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 ZNF833PQ6ZTB9 187 aa19.17■□□□□ 0.66
RAPGEF1-203ENST00000372195 TRPT1Q86TN4 253 aaKnown RBP19.16■□□□□ 0.66
RAPGEF1-203ENST00000372195 MMP23AO75900 390 aa19.16■□□□□ 0.66
RAPGEF1-203ENST00000372195 TRIOBPQ9H2D6 2365 aa19.16■□□□□ 0.66
RAPGEF1-203ENST00000372195 FNDC10F2Z333 226 aa19.16■□□□□ 0.66
RAPGEF1-203ENST00000372195 PFN2P35080 140 aa19.16■□□□□ 0.66
RAPGEF1-203ENST00000372195 SS18Q15532 418 aa19.16■□□□□ 0.66
RAPGEF1-203ENST00000372195 FAM120AOSQ5T036 256 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 PRSS46E5RG02 174 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 ZNF134P52741 427 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 V9GYV3 84 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 TRBV19A0A075B6N1 114 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 C1orf147Q96MC9 270 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 TSSC4Q9Y5U2 329 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 THSD7BQ9C0I4 1608 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 K7ERJ3 54 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 FAM104BQ5XKR9 115 aa19.15■□□□□ 0.66
RAPGEF1-203ENST00000372195 HEATR1Q9H583 2144 aaKnown RBP19.14■□□□□ 0.66
RAPGEF1-203ENST00000372195 RNASE13Q5GAN3 156 aaKnown RBP19.14■□□□□ 0.65
RAPGEF1-203ENST00000372195 UNQ6494/PRO21346Q6UXR6 183 aa19.14■□□□□ 0.65
RAPGEF1-203ENST00000372195 C8orf86Q6ZUL3 223 aa19.14■□□□□ 0.65
RAPGEF1-203ENST00000372195 CACNA1EQ15878 2313 aa19.14■□□□□ 0.65
RAPGEF1-203ENST00000372195 ANXA2RQ3ZCQ2 193 aa19.14■□□□□ 0.65
RAPGEF1-203ENST00000372195 CMC4P56277 68 aaPredicted RBP19.13■□□□□ 0.65
RAPGEF1-203ENST00000372195 C2orf66Q6UXQ4 117 aa19.13■□□□□ 0.65
RAPGEF1-203ENST00000372195 FAM110DQ8TAY7 271 aaPredicted RBP19.13■□□□□ 0.65
RAPGEF1-203ENST00000372195 Q71RC1 249 aaPredicted RBP19.13■□□□□ 0.65
RAPGEF1-203ENST00000372195 IGHV2-70P01814 119 aa19.13■□□□□ 0.65
RAPGEF1-203ENST00000372195 ZNF492Q9P255 531 aa19.12■□□□□ 0.65
RAPGEF1-203ENST00000372195 PLXND1Q9Y4D7 1925 aa19.12■□□□□ 0.65
RAPGEF1-203ENST00000372195 A0A096LPF7 62 aa19.12■□□□□ 0.65
RAPGEF1-203ENST00000372195 MRPL52Q86TS9 123 aaKnown RBP19.12■□□□□ 0.65
RAPGEF1-203ENST00000372195 MORN5Q5VZ52 161 aa19.12■□□□□ 0.65
RAPGEF1-203ENST00000372195 PMVKQ15126 192 aa19.12■□□□□ 0.65
RAPGEF1-203ENST00000372195 H3BMM0 161 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 CDK2AP2O75956 126 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 PDE6HQ13956 83 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 UBE2WQ96B02 151 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 ZC2HC1AQ96GY0 325 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 C20orf144Q9BQM9 153 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 LY6G6EA0A0G2JKS1 128 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 Q8N8P6 123 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 KLF12Q9Y4X4 402 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 U3KQA8 63 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 C9orf118A6NHY6 69 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 IGLL1P15814 213 aa19.11■□□□□ 0.65
RAPGEF1-203ENST00000372195 SMIM27A0A1W2PRY6 76 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 CDPF1Q6NVV7 123 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 C17orf77Q96MU5 243 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 MSMBP08118 114 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 AZU1P20160 251 aa19.1■□□□□ 0.65
RAPGEF1-203ENST00000372195 LMO1P25800 156 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms