RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 SSBP4Q9BWG4 385 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-205ENST00000372067 TMSB15BA0A087X1C1 80 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 K7EP34 96 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 BMPR1BO00238 502 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 C11orf71Q6IPW1 123 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 GAGE12HA6NDE8 117 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 TMEM219Q86XT9 240 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 GPR82Q96P67 336 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 AAMDCQ9H7C9 122 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 MYO18BQ8IUG5 2567 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 PSMB11A5LHX3 300 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 HERV-K104P63124 156 aa13.47□□□□□ -0.25
VEGFA-205ENST00000372067 IGHV3-66A0A0C4DH42 116 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 SAA4P35542 130 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 CSN1S1P47710 185 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 C12orf54Q6X4T0 127 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 C17orf77Q96MU5 243 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 HIGD1CA8MV81 97 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 LY6LH3BQJ8 138 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 I3L2K1 104 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 IGKV1-17P01599 117 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 CRYGCP07315 174 aa13.46□□□□□ -0.25
VEGFA-205ENST00000372067 CIARTQ8N365 385 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-205ENST00000372067 K7EIM0 57 aa13.46□□□□□ -0.26
VEGFA-205ENST00000372067 HOXB4P17483 251 aaPredicted RBP13.46□□□□□ -0.26
VEGFA-205ENST00000372067 GPR183P32249 361 aa13.46□□□□□ -0.26
VEGFA-205ENST00000372067 LY6EQ16553 131 aa13.46□□□□□ -0.26
VEGFA-205ENST00000372067 ZNF785A8K8V0 405 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 H3BUT2 72 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 HLA-DRB1P01911 266 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 TCRAP04437 139 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 ATP5J2P56134 94 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 TMEM136Q6ZRR5 245 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 M0R3E3 92 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 CHEK1O14757 476 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 TCTEX1D4Q5JR98 221 aa13.45□□□□□ -0.26
VEGFA-205ENST00000372067 CT45A10P0DMU9 189 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 DTX2Q86UW9 622 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 GRAMD2BQ96HH9 432 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 CCL19Q99731 98 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 GNB1LQ9BYB4 327 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 SMIM17P0DL12 118 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
VEGFA-205ENST00000372067 NDPQ00604 133 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 RNASEKQ6P5S7 137 aaKnown RBP13.44□□□□□ -0.26
VEGFA-205ENST00000372067 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 GTF2H5Q6ZYL4 71 aa13.44□□□□□ -0.26
VEGFA-205ENST00000372067 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-205ENST00000372067 HLA-DQA1P01909 254 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 MT-ND6P03923 174 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 IGFL4Q6B9Z1 124 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 C2orf91Q6ZV80 131 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 CFHR4Q92496 578 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 IGF2BP2-AS1Q96M15 143 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 SNAI2O43623 268 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 IGLV2-8P01709 118 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 CD300EQ496F6 205 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-205ENST00000372067 SLC25A34Q6PIV7 304 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 MBD6Q96DN6 1003 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 TRAV9-1A0A075B6T8 112 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 A8MWL6 223 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 HSBP1O75506 76 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 FOXA3P55318 350 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-205ENST00000372067 ST20Q9HBF5 79 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 SCRT2Q9NQ03 307 aa13.43□□□□□ -0.26
VEGFA-205ENST00000372067 PVRIGQ6DKI7 326 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 MCRIP2Q9BUT9 160 aaKnown RBP13.42□□□□□ -0.26
VEGFA-205ENST00000372067 OTORQ9NRC9 128 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 GP9P14770 177 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 MINOS1Q5TGZ0 78 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 LINC00173Q6ZV60 143 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 NUP35Q8NFH5 326 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 PRORYQ9H606 182 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 MINOS1-NBL1R4GNA1 71 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 C9orf118A6NHY6 69 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 C18orf32Q8TCD1 76 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 PSG8Q9UQ74 426 aa13.42□□□□□ -0.26
VEGFA-205ENST00000372067 G3V318 75 aa13.41□□□□□ -0.26
VEGFA-205ENST00000372067 FMC1Q96HJ9 113 aa13.41□□□□□ -0.26
VEGFA-205ENST00000372067 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
VEGFA-205ENST00000372067 TRAV40A0A0B4J280 105 aa13.41□□□□□ -0.26
VEGFA-205ENST00000372067 OR2K2Q8NGT1 345 aa13.41□□□□□ -0.26
VEGFA-205ENST00000372067 MAP1AP78559 2803 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-205ENST00000372067 CLEC19AQ6UXS0 136 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 BCL6BQ8N143 479 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-205ENST00000372067 MRAP2Q96G30 205 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 CSN3P07498 182 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 C15orf32Q32M92 178 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 COX19Q49B96 90 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 ZNF491Q8N8L2 437 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 PIMREGQ9BSJ6 248 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 SPATA25Q9BR10 227 aa13.4□□□□□ -0.26
VEGFA-205ENST00000372067 ODF3BA8MYP8 253 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 RABAC1Q9UI14 185 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms