RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 FAM216BQ8N7L0 139 aa9.51□□□□□ -0.89
PTPN1-201ENST00000371621 SPG11Q96JI7 2443 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 IGHV1-45A0A0A0MS14 117 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 FNDC10F2Z333 226 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 SLC25A20O43772 301 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 MRPL51Q4U2R6 128 aaKnown RBP9.5□□□□□ -0.89
PTPN1-201ENST00000371621 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 OTORQ9NRC9 128 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 PHLDA3Q9Y5J5 127 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 IGLV3-1P01715 115 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
PTPN1-201ENST00000371621 WIPF2Q8TF74 440 aaPredicted RBP9.5□□□□□ -0.89
PTPN1-201ENST00000371621 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
PTPN1-201ENST00000371621 PRR20EP86478 221 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 PRR20CP86479 221 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 PRR20DP86480 221 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 PRR20BP86481 221 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 PRR20AP86496 221 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 IL11RAQ14626 422 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 PMVKQ15126 192 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 FAM104BQ5XKR9 115 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 RNF7Q9UBF6 113 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 FGF6P10767 208 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 TRBV6-6A0A0A6YYG2 114 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 GATA1P15976 413 aaPredicted RBP9.49□□□□□ -0.89
PTPN1-201ENST00000371621 CCL3L1P16619 93 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 XGP55808 180 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 TCF15Q12870 199 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 OR13C6PQ8NH95 151 aa9.49□□□□□ -0.89
PTPN1-201ENST00000371621 IGKV3D-15A0A087WSY6 115 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 IGKV3-15P01624 115 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
PTPN1-201ENST00000371621 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 Q86TA4 180 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 C1orf210Q8IVY1 113 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 FGF23Q9GZV9 251 aaPredicted RBP9.48□□□□□ -0.89
PTPN1-201ENST00000371621 KMT2EQ8IZD2 1858 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 CFHR1Q03591 330 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 SRSF1Q07955 248 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTPN1-201ENST00000371621 OR11H6Q8NGC7 330 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 TTTY12Q9BZ98 90 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 FCN3O75636 299 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 C8orf49Q96NF6 230 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
PTPN1-201ENST00000371621 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 CCDC179H3BU77 68 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 RNASE2P10153 161 aaKnown RBP9.47□□□□□ -0.89
PTPN1-201ENST00000371621 LAGE3Q14657 143 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 NGBQ9NPG2 151 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 A0A1W2PR77 199 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 IGLV2-14P01704 120 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 COX6A1P12074 109 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 ZFP2Q6ZN57 461 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 TMEM133Q9H2Q1 129 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
PTPN1-201ENST00000371621 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
PTPN1-201ENST00000371621 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 TRGV8A0A0C4DH27 118 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 LAMTOR5O43504 91 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 IGLV2-8P01709 118 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 UBALD2Q8IYN6 164 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 GCSAMQ8N6F7 178 aa9.46□□□□□ -0.89
PTPN1-201ENST00000371621 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 HAX1O00165 279 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 SH2D1AO60880 128 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 FOXL2NBQ6ZUU3 175 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 KLHL30-AS1Q8NEE0 82 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 PRADC1Q9BSG0 188 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 FABP5P3A8MUU1 101 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 FOXE3Q13461 319 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
PTPN1-201ENST00000371621 ARHGAP32A7KAX9 2087 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 H7C1H1 209 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 ZNF134P52741 427 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 NDUFV3P56181 108 aaKnown RBP9.45□□□□□ -0.9
PTPN1-201ENST00000371621 ZCCHC24Q8N2G6 241 aaKnown RBP9.45□□□□□ -0.9
PTPN1-201ENST00000371621 MAFAQ8NHW3 353 aaPredicted RBP9.45□□□□□ -0.9
PTPN1-201ENST00000371621 SLC25A39Q9BZJ4 359 aaPredicted RBP9.45□□□□□ -0.9
PTPN1-201ENST00000371621 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 PLNP26678 52 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 CD177Q8N6Q3 437 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
PTPN1-201ENST00000371621 ADAMTS9Q9P2N4 1935 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 ZNF503-AS2A6NEH8 195 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 GAGE2AQ6NT46 116 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 OR10J6PQ8NGY7 276 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 MSRB1Q9NZV6 116 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 M0QXV9 152 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 ATP5IP56385 69 aaPredicted RBP9.44□□□□□ -0.9
PTPN1-201ENST00000371621 GFRA4Q9GZZ7 299 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 FOXC1Q12948 553 aa9.44□□□□□ -0.9
PTPN1-201ENST00000371621 TMEM101Q96IK0 257 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms