RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 A0A1W2PS18 150 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 PPIFP30405 207 aaKnown RBP9.2□□□□□ -0.94
PDE6C-201ENST00000371447 TMEM75Q8N9X5 138 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 WFDC12Q8WWY7 111 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 SNHG12Q9BXW3 62 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 OTORQ9NRC9 128 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 IGLV11-55A0A075B6I3 123 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 A8MWL6 223 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 NDUFA3O95167 84 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 RPL11P62913 178 aaKnown RBP9.19□□□□□ -0.94
PDE6C-201ENST00000371447 NPBQ8NG41 125 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 RNF5Q99942 180 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 PSG8Q9UQ74 426 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 NPFFO15130 113 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 TOMM40O96008 361 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 PAX1P15863 534 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 TCTAP57738 103 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
PDE6C-201ENST00000371447 CENPVL3A0A0U1RRI6 287 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 NPIPB5A8MRT5 1133 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 DIRC3C9JPN6 131 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 CTSGP08311 255 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 EGR2P11161 476 aaPredicted RBP9.18□□□□□ -0.94
PDE6C-201ENST00000371447 FXYD7P58549 80 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 ERCC8Q13216 396 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 F8W735 103 aaPredicted RBP9.18□□□□□ -0.94
PDE6C-201ENST00000371447 M0R2Z0 102 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 IGHV4-38-2P0DP08 117 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 C18orf32Q8TCD1 76 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 LOC389332A0A1B0GUA5 103 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 H3BRN7 92 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 LTAP01374 205 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 APOHP02749 345 aaPredicted RBP9.18□□□□□ -0.94
PDE6C-201ENST00000371447 MT-ND6P03923 174 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 RPLP1P05386 114 aaKnown RBP9.18□□□□□ -0.94
PDE6C-201ENST00000371447 GPX1P07203 203 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 ARMS2P0C7Q2 107 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 CT45A10P0DMU9 189 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 CSN1S1P47710 185 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 BORCS7Q96B45 105 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
PDE6C-201ENST00000371447 K7EQM0 130 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 UBE2E1P51965 193 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 HBBP68871 147 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 ODF1Q14990 250 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 VGLL1Q99990 258 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 PMCHL2Q9BQD1 86 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 C7orf69Q9H7B7 122 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 IGHV4-30-2A0A087WSY4 118 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 A8MWP6 167 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 VAMP8Q9BV40 100 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 RABAC1Q9UI14 185 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 ACANP16112 2415 aa9.17□□□□□ -0.94
PDE6C-201ENST00000371447 C20orf202A1L168 122 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 DEFB1P60022 68 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 MBD6Q96DN6 1003 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 IGLC2P0DOY2 106 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 MLST8Q9BVC4 326 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 ZNF324O75467 553 aaPredicted RBP9.16□□□□□ -0.94
PDE6C-201ENST00000371447 TFPI2P48307 235 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 PLP1P60201 277 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 KCNS1Q96KK3 526 aa9.16□□□□□ -0.94
PDE6C-201ENST00000371447 MTORP42345 2549 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 ORM1P02763 201 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 CDKN1BP46527 198 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 PAFAH1B2P68402 229 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 KLF12Q9Y4X4 402 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 TRBV9A0A0B4J1U6 114 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 PRAC2D3DTV9 90 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 H3BUX3 64 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 SPRY2O43597 315 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 C3orf79P0CE67 100 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 SRD5A1P18405 259 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 CRIP1P50238 77 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 MINOS1Q5TGZ0 78 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 TTC9CQ8N5M4 171 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 MINOS1-NBL1R4GNA1 71 aa9.15□□□□□ -0.94
PDE6C-201ENST00000371447 TEX15Q9BXT5 2789 aa9.15□□□□□ -0.95
PDE6C-201ENST00000371447 TMEM213A2RRL7 107 aa9.15□□□□□ -0.95
PDE6C-201ENST00000371447 BLCAPP62952 87 aa9.15□□□□□ -0.95
PDE6C-201ENST00000371447 RBPMS2Q6ZRY4 209 aaKnown RBP9.15□□□□□ -0.95
PDE6C-201ENST00000371447 Q6ZS46 218 aa9.15□□□□□ -0.95
PDE6C-201ENST00000371447 NIT1Q86X76 327 aa9.15□□□□□ -0.95
PDE6C-201ENST00000371447 TP73-AS1Q9UF72 201 aa9.15□□□□□ -0.95
PDE6C-201ENST00000371447 Q0VG73 95 aa9.14□□□□□ -0.95
PDE6C-201ENST00000371447 PSG3Q16557 428 aa9.14□□□□□ -0.95
PDE6C-201ENST00000371447 FAM231DQ6ZW35 169 aa9.14□□□□□ -0.95
PDE6C-201ENST00000371447 ALKBH7Q9BT30 221 aaPredicted RBP9.14□□□□□ -0.95
PDE6C-201ENST00000371447 FBN2P35556 2912 aa9.14□□□□□ -0.95
PDE6C-201ENST00000371447 TRAV30A0A087WSZ9 112 aa9.14□□□□□ -0.95
PDE6C-201ENST00000371447 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms