RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PDE6HQ13956 83 aa10.25□□□□□ -0.77
TPM3-211ENST00000368531 FOXI2Q6ZQN5 318 aa10.25□□□□□ -0.77
TPM3-211ENST00000368531 SBSPONQ8IVN8 264 aa10.25□□□□□ -0.77
TPM3-211ENST00000368531 Q9H3A6 140 aa10.25□□□□□ -0.77
TPM3-211ENST00000368531 SAV1Q9H4B6 383 aaPredicted RBP10.25□□□□□ -0.77
TPM3-211ENST00000368531 PGPA6NDG6 321 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 PRAC2D3DTV9 90 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 H3BMM0 161 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 H2AFB1P0C5Y9 115 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 SULT1A2P50226 295 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 FXYD7P58549 80 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
TPM3-211ENST00000368531 HAGHQ16775 308 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 DPPA3Q6W0C5 159 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 LINC00322Q6ZN03 302 aaPredicted RBP10.24□□□□□ -0.77
TPM3-211ENST00000368531 TRPT1Q86TN4 253 aaKnown RBP10.24□□□□□ -0.77
TPM3-211ENST00000368531 TMEM167BQ9NRX6 74 aa10.24□□□□□ -0.77
TPM3-211ENST00000368531 A0A0J9YX75 114 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 RAB5CP51148 216 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 UBE2G2P60604 165 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 OR8A1Q8NGG7 326 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 CLEC5AQ9NY25 188 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 RPH3ALQ9UNE2 315 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
TPM3-211ENST00000368531 ZNF705EA8MWA4 302 aaPredicted RBP10.22□□□□□ -0.77
TPM3-211ENST00000368531 CNN1P51911 297 aaKnown RBP10.22□□□□□ -0.77
TPM3-211ENST00000368531 APOC4P55056 127 aa10.22□□□□□ -0.77
TPM3-211ENST00000368531 OR10J6PQ8NGY7 276 aa10.22□□□□□ -0.77
TPM3-211ENST00000368531 MBD3L1Q8WWY6 194 aa10.22□□□□□ -0.77
TPM3-211ENST00000368531 B9D2Q9BPU9 175 aa10.22□□□□□ -0.77
TPM3-211ENST00000368531 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
TPM3-211ENST00000368531 OTORQ9NRC9 128 aa10.22□□□□□ -0.77
TPM3-211ENST00000368531 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.77
TPM3-211ENST00000368531 DUSP14O95147 198 aaKnown RBP10.21□□□□□ -0.77
TPM3-211ENST00000368531 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.77
TPM3-211ENST00000368531 CSN1S1P47710 185 aa10.21□□□□□ -0.77
TPM3-211ENST00000368531 ERCC8Q13216 396 aa10.21□□□□□ -0.77
TPM3-211ENST00000368531 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.77
TPM3-211ENST00000368531 RETNQ9HD89 108 aa10.21□□□□□ -0.77
TPM3-211ENST00000368531 PPP1R14DQ9NXH3 145 aa10.21□□□□□ -0.77
TPM3-211ENST00000368531 CA1P00915 261 aaPredicted RBP10.2□□□□□ -0.78
TPM3-211ENST00000368531 SLC25A5P05141 298 aaKnown RBP10.2□□□□□ -0.78
TPM3-211ENST00000368531 SUMO1P63165 101 aaKnown RBP10.2□□□□□ -0.78
TPM3-211ENST00000368531 CMTM2Q8TAZ6 248 aa10.2□□□□□ -0.78
TPM3-211ENST00000368531 SUN5Q8TC36 379 aa10.2□□□□□ -0.78
TPM3-211ENST00000368531 MRPL53Q96EL3 112 aaKnown RBP10.2□□□□□ -0.78
TPM3-211ENST00000368531 SLC35B3Q9H1N7 401 aa10.2□□□□□ -0.78
TPM3-211ENST00000368531 YTHDF2Q9Y5A9 579 aaKnown RBP10.2□□□□□ -0.78
TPM3-211ENST00000368531 KIR2DL5BA0A0G2JN68 375 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 KIR2DL5BA0A0G2JPC4 375 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 GNG5P63218 68 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 CCL20P78556 96 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 MORN3Q6PF18 240 aaPredicted RBP10.19□□□□□ -0.78
TPM3-211ENST00000368531 KIR2DL5AQ8N109 375 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 KIR2DL5BQ8NHK3 375 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
TPM3-211ENST00000368531 GGTLC3B5MD39 225 aa10.18□□□□□ -0.78
TPM3-211ENST00000368531 TEX46H3BTG2 121 aa10.18□□□□□ -0.78
TPM3-211ENST00000368531 PAGE4O60829 102 aa10.18□□□□□ -0.78
TPM3-211ENST00000368531 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
TPM3-211ENST00000368531 SPINK13Q1W4C9 94 aa10.18□□□□□ -0.78
TPM3-211ENST00000368531 RXFP4Q8TDU9 374 aa10.18□□□□□ -0.78
TPM3-211ENST00000368531 VGLL1Q99990 258 aa10.18□□□□□ -0.78
TPM3-211ENST00000368531 A0A1W2PRE2 83 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 FAM74A7A6NL05 159 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 DIRC3C9JPN6 131 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 J3KRW8 73 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 M0R2Z0 102 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 UBE2CO00762 179 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 IFNA7P01567 189 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 HBE1P02100 147 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 GIG44P09565 113 aaPredicted RBP10.17□□□□□ -0.78
TPM3-211ENST00000368531 AMTNQ6UX39 209 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 AGPAT4-IT1Q9H0P7 198 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 GNG13Q9P2W3 67 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 DNAH3Q8TD57 4116 aa10.17□□□□□ -0.78
TPM3-211ENST00000368531 TRAV1-1A0A0B4J248 108 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 NPIPB6E9PJ23 425 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 CT45A10P0DMU9 189 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 ATP5G3P48201 142 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 TEX261Q6UWH6 196 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 C5orf17Q8NAS9 161 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 PCNPQ8WW12 178 aaKnown RBP10.16□□□□□ -0.78
TPM3-211ENST00000368531 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 CLUHP3Q96NS8 147 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 RCHY1Q96PM5 261 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
TPM3-211ENST00000368531 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 TRAV12-2A0A075B6T6 113 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 A8MTW9 85 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 SPRY2O43597 315 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 TMEM78Q5T7P6 136 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms