RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 NDUFB4O95168 129 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 IFNA1P01562 189 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 PPT1P50897 306 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 LYPD1Q8N2G4 141 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 ZNF680Q8NEM1 530 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 RPUSD4Q96CM3 377 aaKnown RBP9.39□□□□□ -0.91
EFNA1-201ENST00000368406 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 SLC25A5P05141 298 aaKnown RBP9.39□□□□□ -0.91
EFNA1-201ENST00000368406 NHLRC4P0CG21 123 aaPredicted RBP9.39□□□□□ -0.91
EFNA1-201ENST00000368406 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 PRB4P10163 310 aaPredicted RBP9.39□□□□□ -0.91
EFNA1-201ENST00000368406 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
EFNA1-201ENST00000368406 CST9LP1Q5W188 147 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 FOXI2Q6ZQN5 318 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 OR10J6PQ8NGY7 276 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
EFNA1-201ENST00000368406 PGPA6NDG6 321 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
EFNA1-201ENST00000368406 F6UB75 175 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 M0R3E3 92 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 IGKV3-20P01619 116 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
EFNA1-201ENST00000368406 DEFB1P60022 68 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 RAB14P61106 215 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
EFNA1-201ENST00000368406 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
EFNA1-201ENST00000368406 MANBALQ9NQG1 85 aa9.38□□□□□ -0.91
EFNA1-201ENST00000368406 TRAV1-1A0A0B4J248 108 aa9.37□□□□□ -0.91
EFNA1-201ENST00000368406 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
EFNA1-201ENST00000368406 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
EFNA1-201ENST00000368406 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
EFNA1-201ENST00000368406 ZNF705DP0CH99 300 aaPredicted RBP9.37□□□□□ -0.91
EFNA1-201ENST00000368406 ZNF705BP0CI00 300 aaPredicted RBP9.37□□□□□ -0.91
EFNA1-201ENST00000368406 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
EFNA1-201ENST00000368406 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
EFNA1-201ENST00000368406 LOC102724200A0A096LPH7 203 aaPredicted RBP9.36□□□□□ -0.91
EFNA1-201ENST00000368406 A0A0J9YX75 114 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 K7EQM0 130 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 PAGE4O60829 102 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 HLA-DRB4P13762 266 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 SUMO1P63165 101 aaKnown RBP9.36□□□□□ -0.91
EFNA1-201ENST00000368406 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 C5orf17Q8NAS9 161 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 SUN5Q8TC36 379 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 PCNPQ8WW12 178 aaKnown RBP9.36□□□□□ -0.91
EFNA1-201ENST00000368406 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 NKX6-2Q9C056 277 aaPredicted RBP9.36□□□□□ -0.91
EFNA1-201ENST00000368406 HLA-DRB4X5D2U9 266 aa9.36□□□□□ -0.91
EFNA1-201ENST00000368406 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
EFNA1-201ENST00000368406 FAM74A7A6NL05 159 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 GGTLC3B5MD39 225 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
EFNA1-201ENST00000368406 CNN1P51911 297 aaKnown RBP9.35□□□□□ -0.91
EFNA1-201ENST00000368406 APOC4P55056 127 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 GNG5P63218 68 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 CCL20P78556 96 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 ZNF767PQ75MW2 155 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 ARL2-SNX15V9GYD0 113 aa9.35□□□□□ -0.91
EFNA1-201ENST00000368406 C11orf94C9JXX5 98 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 PRAC2D3DTV9 90 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 H3BMM0 161 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
EFNA1-201ENST00000368406 HAGHQ16775 308 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 TMEM78Q5T7P6 136 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 GOLT1AQ6ZVE7 132 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
EFNA1-201ENST00000368406 DIRC3C9JPN6 131 aa9.33□□□□□ -0.92
EFNA1-201ENST00000368406 F6UZH7 168 aa9.33□□□□□ -0.92
EFNA1-201ENST00000368406 ATP5G3P48201 142 aa9.33□□□□□ -0.92
EFNA1-201ENST00000368406 LINC00322Q6ZN03 302 aaPredicted RBP9.33□□□□□ -0.92
EFNA1-201ENST00000368406 TRPT1Q86TN4 253 aaKnown RBP9.33□□□□□ -0.92
EFNA1-201ENST00000368406 SERTM2A0A1B0GWG4 89 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 RBMY1BA6NDE4 496 aaKnown RBP9.32□□□□□ -0.92
EFNA1-201ENST00000368406 RBMY1EA6NEQ0 496 aaKnown RBP9.32□□□□□ -0.92
EFNA1-201ENST00000368406 PEX7O00628 323 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
EFNA1-201ENST00000368406 RBMY1DP0C7P1 496 aaKnown RBP9.32□□□□□ -0.92
EFNA1-201ENST00000368406 BCL2P10415 239 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
EFNA1-201ENST00000368406 FXYD7P58549 80 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 ERCC8Q13216 396 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 MORN3Q6PF18 240 aaPredicted RBP9.32□□□□□ -0.92
EFNA1-201ENST00000368406 CYB561D1Q8N8Q1 229 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 ASCL2Q99929 193 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 ATG101Q9BSB4 218 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
EFNA1-201ENST00000368406 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 TCRAP04437 139 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 AKR1C3P42330 323 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 UBE2G1P62253 170 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 MEF2BQ02080 365 aaPredicted RBP9.31□□□□□ -0.92
EFNA1-201ENST00000368406 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 HIST1H2BAQ96A08 127 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 TCEAL7Q9BRU2 100 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms