RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 UBE2L6O14933 153 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 CRXO43186 299 aaPredicted RBP9.33□□□□□ -0.92
COPA-202ENST00000368069 WISP2O76076 250 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 ZNF418Q8TF45 676 aaPredicted RBP9.33□□□□□ -0.92
COPA-202ENST00000368069 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 C9orf139Q6ZV77 190 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 SMPXQ9UHP9 88 aa9.33□□□□□ -0.92
COPA-202ENST00000368069 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 TEX43Q6ZNM6 134 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 BPESC1Q9GZL8 116 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 KAAG1Q9UBP8 84 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 MED12LQ86YW9 2145 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 EML6Q6ZMW3 1958 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 H3BRN7 92 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 K7ENP7 123 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 NUPR1O60356 82 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 PLA2G5P39877 138 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 SFTA2Q6UW10 78 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 H3BUX3 64 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 HAX1O00165 279 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 UBE2V1Q13404 147 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 RNF182Q8N6D2 247 aa9.32□□□□□ -0.92
COPA-202ENST00000368069 C10orf142B7Z368 130 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 ZNF295-AS1Q8N0V1 137 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 ITLN2Q8WWU7 325 aaPredicted RBP9.31□□□□□ -0.92
COPA-202ENST00000368069 BDP1A6H8Y1 2624 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 ATP6V0E1O15342 81 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 ZC2HC1AQ96GY0 325 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 FAM104BQ5XKR9 115 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 BCL6BQ8N143 479 aaPredicted RBP9.31□□□□□ -0.92
COPA-202ENST00000368069 STPG4Q8N801 248 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 IGLL1P15814 213 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
COPA-202ENST00000368069 MSMPQ1L6U9 139 aa9.31□□□□□ -0.92
COPA-202ENST00000368069 MEGF9Q9H1U4 602 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 COX11Q9Y6N1 276 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 SAMD5Q5TGI4 173 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 OR5A1Q8NGJ0 315 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
COPA-202ENST00000368069 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 PRSS46E5RG02 174 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 CD300EQ496F6 205 aaPredicted RBP9.3□□□□□ -0.92
COPA-202ENST00000368069 UNQ6494/PRO21346Q6UXR6 183 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 SEM1Q6ZVN7 128 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
COPA-202ENST00000368069 TNFRSF6BO95407 300 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 P0C879 139 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 ZC2HC1BQ5TFG8 222 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 SHISA9B4DS77 424 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 LTAP01374 205 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 GNLYP22749 145 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 SUMO2P61956 95 aaKnown RBP9.29□□□□□ -0.92
COPA-202ENST00000368069 C14orf178Q8N769 122 aaPredicted RBP9.29□□□□□ -0.92
COPA-202ENST00000368069 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 G3V318 75 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 LINC00477Q96M19 166 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 C17orf77Q96MU5 243 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 LINC01587Q99440 93 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 PRR25Q96S07 402 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 VCX2Q9H322 139 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
COPA-202ENST00000368069 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
COPA-202ENST00000368069 UBE2E1P51965 193 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 C22orf46C9J442 243 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 NPSP0C0P6 89 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 ZNF688P0C7X2 276 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 MAJINQ3KP22 176 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 TEX29Q8N6K0 151 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 SMAD7O15105 426 aaKnown RBP9.28□□□□□ -0.92
COPA-202ENST00000368069 CD5LO43866 347 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
COPA-202ENST00000368069 RUSC1-AS1Q66K80 236 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 ZNF491Q8N8L2 437 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 BRWD1-AS2P59051 145 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 WIPF2Q8TF74 440 aaPredicted RBP9.28□□□□□ -0.92
COPA-202ENST00000368069 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 RITA1Q96K30 269 aa9.28□□□□□ -0.92
COPA-202ENST00000368069 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
COPA-202ENST00000368069 FCN3O75636 299 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms