RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 SPCS2Q15005 226 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 Q5VSD8 79 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 GFI1BQ5VTD9 330 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 DIRAS2Q96HU8 199 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 VSIG2Q96IQ7 327 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 ZNF331Q9NQX6 463 aaPredicted RBP6.72□□□□□ -1.33
NUP43-203ENST00000367404 MCUBQ9NWR8 336 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 PPP1R14DQ9NXH3 145 aa6.72□□□□□ -1.33
NUP43-203ENST00000367404 RSL24D1Q9UHA3 163 aaKnown RBP6.72□□□□□ -1.33
NUP43-203ENST00000367404 RLN2P04090 185 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 PRB4P10163 310 aaPredicted RBP6.71□□□□□ -1.34
NUP43-203ENST00000367404 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
NUP43-203ENST00000367404 C4orf46Q504U0 113 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 SPANXN5Q5MJ07 72 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 LCN15Q6UWW0 184 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 PATE2Q6UY27 113 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 TMED4Q7Z7H5 227 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 CCDC28AQ8IWP9 274 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 ODF3Q96PU9 254 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 SLC50A1Q9BRV3 221 aa6.71□□□□□ -1.34
NUP43-203ENST00000367404 CCDC59Q9P031 241 aaKnown RBP6.71□□□□□ -1.34
NUP43-203ENST00000367404 STRAPQ9Y3F4 350 aaKnown RBP6.71□□□□□ -1.34
NUP43-203ENST00000367404 SNURFLB1AK76 121 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 FNDC10F2Z333 226 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 SFT2D2O95562 160 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 OR5G3P0C626 314 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 ERVFC1-1P60608 527 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 S100A7AQ86SG5 101 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 ZBTB8BQ8NAP8 495 aaPredicted RBP6.7□□□□□ -1.34
NUP43-203ENST00000367404 LRRC20Q8TCA0 184 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 TRIM63Q969Q1 353 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 PARD6GQ9BYG4 376 aaPredicted RBP6.7□□□□□ -1.34
NUP43-203ENST00000367404 PTTG2Q9NZH5 202 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 RNF24Q9Y225 148 aa6.7□□□□□ -1.34
NUP43-203ENST00000367404 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
NUP43-203ENST00000367404 SMCO3A2RU48 225 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 SLC17A3O00476 420 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 SIVA1O15304 175 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 FAUP35544 74 aaKnown RBP6.69□□□□□ -1.34
NUP43-203ENST00000367404 PPP1R1AQ13522 171 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 PXDC1Q5TGL8 231 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 Q6ZTI0 123 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 DYNC2LI1Q8TCX1 351 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 FRZBQ92765 325 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 PYGO2Q9BRQ0 406 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 ARV1Q9H2C2 271 aa6.69□□□□□ -1.34
NUP43-203ENST00000367404 LINC00854A0A1B0GVQ3 168 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 CCNKO75909 580 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 HOXB5P09067 269 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 FUSP35637 526 aaKnown RBP eCLIP6.68□□□□□ -1.34
NUP43-203ENST00000367404 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 POLR2GP62487 172 aaKnown RBP eCLIP6.68□□□□□ -1.34
NUP43-203ENST00000367404 TMEM14EPQ6UXP3 125 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 CCDC190Q86UF4 302 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 C11orf72Q8NBR9 251 aa6.68□□□□□ -1.34
NUP43-203ENST00000367404 SLC25A21Q9BQT8 299 aaPredicted RBP6.68□□□□□ -1.34
NUP43-203ENST00000367404 A0A087WTM6 91 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 NXPH4O95158 308 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 DNAH10OSP0CZ25 163 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 CT45A10P0DMU9 189 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 ANXA7P20073 488 aaKnown RBP6.67□□□□□ -1.34
NUP43-203ENST00000367404 LEPP41159 167 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 SLC38A11Q08AI6 406 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 ICAM4Q14773 271 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 LINC00305Q7Z4B0 112 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 ZNF546Q86UE3 836 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 NFE4Q86UQ8 179 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 BPIFA4PQ86YQ2 179 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 ZNF680Q8NEM1 530 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 ZNF431Q8TF32 576 aaPredicted RBP6.67□□□□□ -1.34
NUP43-203ENST00000367404 DEDD2Q8WXF8 326 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 SAT2Q96F10 170 aaPredicted RBP6.67□□□□□ -1.34
NUP43-203ENST00000367404 SMIM8Q96KF7 97 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 LINC00467Q9BRT7 94 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 SLIRPQ9GZT3 109 aaKnown RBP6.67□□□□□ -1.34
NUP43-203ENST00000367404 NPVFQ9HCQ7 196 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 PSENENQ9NZ42 101 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 PXMP4Q9Y6I8 212 aa6.67□□□□□ -1.34
NUP43-203ENST00000367404 TRGV2A0A075B6R0 118 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 TRAV12-3A0A0B4J271 114 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 FABP12A6NFH5 140 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 SSSCA1O60232 199 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 SNRPCP09234 159 aaKnown RBP6.66□□□□□ -1.34
NUP43-203ENST00000367404 TNFSF8P32971 234 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 AP3S2P59780 193 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 UBE2MP61081 183 aaKnown RBP6.66□□□□□ -1.34
NUP43-203ENST00000367404 RRAS2P62070 204 aaPredicted RBP6.66□□□□□ -1.34
NUP43-203ENST00000367404 ANXA2RQ3ZCQ2 193 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 MORN5Q5VZ52 161 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 RAB2BQ8WUD1 216 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 TMEM37Q8WXS4 190 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 BCL7BQ9BQE9 202 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 ICOSQ9Y6W8 199 aa6.66□□□□□ -1.34
NUP43-203ENST00000367404 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
NUP43-203ENST00000367404 KLLNB2CW77 178 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms