RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 OR8B3Q8NGG8 313 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 MYOZ3Q8TDC0 251 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 LMX1AQ8TE12 382 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 SMIM4Q8WVI0 70 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 GEMIN6Q8WXD5 167 aaKnown RBP1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 AQP3Q92482 292 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 FGF11Q92914 225 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 LSM10Q969L4 123 aaKnown RBP1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 C2orf50Q96LR7 162 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGF2BP2-AS1Q96M15 143 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 OR2A5Q96R48 311 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 MGST2Q99735 147 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 C20orf78Q9BR46 151 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 SHANK2-AS3Q9BTD1 123 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 GABARAPL3Q9BY60 117 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 PLA2G2FQ9BZM2 168 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 NMES1Q9C002 83 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 PLEKHF2Q9H8W4 249 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 OTORQ9NRC9 128 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 SLC39A9Q9NUM3 307 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 ABRACLQ9P1F3 81 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 RBM12B-AS1Q9P1G2 102 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 TAAR3PQ9P1P4 343 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 CKLFQ9UBR5 152 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 HES2Q9Y543 173 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAPPC1Q9Y5R8 145 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 DNAJC15Q9Y5T4 150 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 FANCMQ8IYD8 2048 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 CCDC88CQ9P219 2028 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 DSPPQ9NZW4 1301 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 QSER1Q2KHR3 1735 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 MON2Q7Z3U7 1717 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 SIPA1L3O60292 1781 aaPredicted RBP1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 RGPD2P0DJD1 1756 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 AFDNP55196 1824 aaKnown RBP1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 PATJQ8NI35 1801 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
RNU4-42P-201ENST00000364738 VWA8A3KMH1 1905 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 MYLKQ15746 1914 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 KCPQ6ZWJ8 1503 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SAMD9LQ8IVG5 1584 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 C5P01031 1676 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 PKD1L3Q7Z443 1732 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 KIDINS220Q9ULH0 1771 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ARFGEF2Q9Y6D5 1785 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGLV3-22A0A075B6J6 115 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGHV3OR16-9A0A0B4J2B5 98 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 A0A1B0GXF2 115 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 GRIFINA4D1Z8 144 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 PGPA6NDG6 321 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 A8MWL6 223 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 C8orf87E5RJ46 101 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 E9PLD3 99 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 H3BP45 60 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SYNGR2O43760 224 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SS18L1O75177 396 aaPredicted RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF324O75467 553 aaPredicted RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SOD1P00441 154 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGHV3-7P01780 117 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGKCP01834 107 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 HLA-DQA1P01909 254 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 TCRAP04437 139 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ACYP1P07311 99 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SRP19P09132 144 aaKnown RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 HOXB7P09629 217 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 C3orf79P0CE67 100 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SCGB1C2P0DMR2 95 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 COX8AP10176 69 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 HLA-DRB4P13762 266 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGLL1P15814 213 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 MPV17P39210 176 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 MYCNOSP40205 109 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 PTGDSP41222 190 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ATP5EP56381 51 aaPredicted RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ADIGQ0VDE8 80 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ERCC8Q13216 396 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 WFDC2Q14508 124 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 LINC00303Q3SY05 128 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 TMEM52BQ4KMG9 183 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 NMSQ5H8A3 153 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 CLEC19AQ6UXS0 136 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 Q6ZS49 121 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ATP5L2Q7Z4Y8 100 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SPATA12Q7Z6I5 190 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 HMGN2P46Q86SG4 172 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 BAGE3Q86Y29 109 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 BAGE2Q86Y30 109 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 AMN1Q8IY45 258 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 LYPD1Q8N2G4 141 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZCCHC24Q8N2G6 241 aaKnown RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SLC22A24Q8N4F4 322 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 CYB561D1Q8N8Q1 229 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM213BQ8TBF2 198 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 PPP1R1CQ8WVI7 109 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 KLK6Q92876 244 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 FGF13Q92913 245 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM3DQ96BQ1 224 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM19A4Q96LR4 140 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 C18orf15Q96N68 181 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 AMELYQ99218 206 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms