RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CSN2P05814 226 aa0.37□□□□□ -2.35
RNU6-560P-201ENST00000364007 SPINT3P49223 89 aa0.37□□□□□ -2.35
RNU6-560P-201ENST00000364007 OR13C6PQ8NH95 151 aa0.37□□□□□ -2.35
RNU6-560P-201ENST00000364007 TRBV30A0A0K0K1B3 111 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 FXYD4P59646 89 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 MIR22HGQ0VDD5 57 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 C1orf140Q5VVS0 124 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 FOXI2Q6ZQN5 318 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 SMIM20Q8N5G0 67 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 TCEAL2Q9H3H9 227 aaPredicted RBP0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 HSPB8Q9UJY1 196 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 RNF11Q9Y3C5 154 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 USP54Q70EL1 1684 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 CTTNBP2Q8WZ74 1663 aa0.36□□□□□ -2.35
RNU6-560P-201ENST00000364007 MYH1P12882 1939 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 A0A096LPI6 279 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 TRAV5A0A0B4J249 113 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 ZNF727A8MUV8 499 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 PPP1R2P41236 205 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 GNG3P63215 75 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 HBBP68871 147 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 RPL19P84098 196 aaKnown RBP0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 OCIAD2Q56VL3 154 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 Q86TA4 180 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 MALSU1Q96EH3 234 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.35□□□□□ -2.35
RNU6-560P-201ENST00000364007 LYRM1O43325 122 aa0.34□□□□□ -2.36
RNU6-560P-201ENST00000364007 ZNF137PP52743 207 aa0.34□□□□□ -2.36
RNU6-560P-201ENST00000364007 C6orf52Q5T4I8 152 aa0.34□□□□□ -2.36
RNU6-560P-201ENST00000364007 FKBP1CQ5VVH2 108 aa0.34□□□□□ -2.36
RNU6-560P-201ENST00000364007 ZCCHC23Q6ZST2 131 aa0.34□□□□□ -2.36
RNU6-560P-201ENST00000364007 FAM216BQ8N7L0 139 aa0.34□□□□□ -2.36
RNU6-560P-201ENST00000364007 TAS2R41P59536 307 aa0.33□□□□□ -2.36
RNU6-560P-201ENST00000364007 Q6ZQY7 126 aa0.33□□□□□ -2.36
RNU6-560P-201ENST00000364007 ATOH7Q8N100 152 aa0.33□□□□□ -2.36
RNU6-560P-201ENST00000364007 OR2H1Q9GZK4 316 aa0.33□□□□□ -2.36
RNU6-560P-201ENST00000364007 STOML2Q9UJZ1 356 aa0.33□□□□□ -2.36
RNU6-560P-201ENST00000364007 EIF3AQ14152 1382 aaKnown RBP0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 GPR31O00270 319 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 IGHV3-33P01772 117 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 GLRXP35754 106 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 RPL35P42766 123 aaKnown RBP0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 RPL37AP61513 92 aaKnown RBP0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 BASP1P80723 227 aaKnown RBP0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 DIAPH2-AS1Q14236 149 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 LTC4SQ16873 150 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 VMA21Q3ZAQ7 101 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 PHF5AQ7RTV0 110 aaKnown RBP0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 CARD19Q96LW7 228 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 FAM103A1Q9BTL3 118 aaKnown RBP0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 CST11Q9H112 138 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 TAF9BQ9HBM6 251 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
RNU6-560P-201ENST00000364007 AFDNP55196 1824 aaKnown RBP0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 FER1L6Q2WGJ9 1857 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 MT-ND6P03923 174 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 KDELR1P24390 212 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 SPINK7P58062 85 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 RTL8BQ17RB0 113 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 Q6ZS92 163 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 LYG2Q86SG7 212 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 LINC00269Q8N2A0 174 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 NUP35Q8NFH5 326 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 AP3S1Q92572 193 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 CCL19Q99731 98 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 RTL8AQ9BWD3 113 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 RTL9Q8NET4 1388 aa0.31□□□□□ -2.36
RNU6-560P-201ENST00000364007 CST7O76096 145 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 LINC00299Q6ZSB3 139 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 TMED4Q7Z7H5 227 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 PLEKHB2Q96CS7 222 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 HOPXQ9BPY8 73 aaPredicted RBP0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 OTORQ9NRC9 128 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 BOKQ9UMX3 212 aaPredicted RBP0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 TECPR2O15040 1411 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
RNU6-560P-201ENST00000364007 POU6F1Q14863 301 aa0.29□□□□□ -2.36
RNU6-560P-201ENST00000364007 PLAC4Q8WY50 150 aa0.29□□□□□ -2.36
RNU6-560P-201ENST00000364007 BORCS8Q96FH0 119 aa0.29□□□□□ -2.36
RNU6-560P-201ENST00000364007 OR4C12Q96R67 309 aa0.29□□□□□ -2.36
RNU6-560P-201ENST00000364007 TPRKBQ9Y3C4 175 aa0.29□□□□□ -2.36
RNU6-560P-201ENST00000364007 UFC1Q9Y3C8 167 aa0.29□□□□□ -2.36
RNU6-560P-201ENST00000364007 SYNMO15061 1565 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 CCL4P13236 92 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 PDE6GP18545 87 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 CROCCP2Q86T23 111 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 CDC26Q8NHZ8 85 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 NEK7Q8TDX7 302 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 JPT1Q9UK76 154 aa0.28□□□□□ -2.36
RNU6-560P-201ENST00000364007 KIAA1107Q9UPP5 1409 aa0.28□□□□□ -2.37
RNU6-560P-201ENST00000364007 MEGF8Q7Z7M0 2845 aa0.28□□□□□ -2.37
RNU6-560P-201ENST00000364007 A0A0J9YY99 117 aa0.27□□□□□ -2.37
RNU6-560P-201ENST00000364007 FABP4P15090 132 aa0.27□□□□□ -2.37
RNU6-560P-201ENST00000364007 NEDD8Q15843 81 aa0.27□□□□□ -2.37
RNU6-560P-201ENST00000364007 PRR15Q8IV56 129 aa0.27□□□□□ -2.37
RNU6-560P-201ENST00000364007 RMND5BQ96G75 393 aaPredicted RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms