RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RPUSD4Q96CM3 377 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 MAP1LC3BQ9GZQ8 125 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 OTORQ9NRC9 128 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 ARL2-SNX15V9GYD0 113 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 TRAV1-1A0A0B4J248 108 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 A0A1W2PRE2 83 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 KNCNA6PVL3 124 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 A8MTW9 85 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 TEX46H3BTG2 121 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 CSN1S1P47710 185 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 FHITP49789 147 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 PPT1P50897 306 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 RANP62826 216 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 ZNF124Q15973 351 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 OR8A1Q8NGG7 326 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 CSTL1Q9H114 145 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 Q9H3A6 140 aa10.19□□□□□ -0.78
NSMCE1-201ENST00000361439 HAGHQ16775 308 aa10.18□□□□□ -0.78
NSMCE1-201ENST00000361439 OR10J6PQ8NGY7 276 aa10.18□□□□□ -0.78
NSMCE1-201ENST00000361439 SFT2D1Q8WV19 159 aa10.18□□□□□ -0.78
NSMCE1-201ENST00000361439 PRKDCP78527 4128 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-201ENST00000361439 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 EIF3GO75821 320 aaKnown RBP eCLIP10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 HBE1P02100 147 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 SLC25A5P05141 298 aaKnown RBP10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 ICAM4Q14773 271 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 GDF5OSQ5U4N7 250 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 Q6ZWC4 215 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 C1QTNF4Q9BXJ3 329 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
NSMCE1-201ENST00000361439 SERTM2A0A1B0GWG4 89 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 ZNF705FA8MVS1 300 aaPredicted RBP10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 F6UB75 175 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 BOLA2-SMG1P6H3BVE0 249 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 CNN1P51911 297 aaKnown RBP10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 PMS2P11Q13670 270 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 SBSPONQ8IVN8 264 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 OR4B1Q8NGF8 309 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 CMTM2Q8TAZ6 248 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 ODF3Q96PU9 254 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 TCEAL7Q9BRU2 100 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
NSMCE1-201ENST00000361439 PGPA6NDG6 321 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 NPIPB6E9PJ23 425 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 M0R3E3 92 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 AMBPP02760 352 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 FGF8P55075 233 aaPredicted RBP10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 HIST1H1AQ02539 215 aaPredicted RBP10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 ALKAL2Q6UX46 152 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 IQCF2Q8IXL9 164 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 C5orf17Q8NAS9 161 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 ZMAT4Q9H898 229 aa10.15□□□□□ -0.78
NSMCE1-201ENST00000361439 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 FAM74A7A6NL05 159 aa10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 ZNF705EA8MWA4 302 aaPredicted RBP10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 AMTNQ6UX39 209 aa10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 C9orf47Q6ZRZ4 202 aa10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 TMPRSS5Q9H3S3 457 aa10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 PPP1R14DQ9NXH3 145 aa10.14□□□□□ -0.79
NSMCE1-201ENST00000361439 FBLL1A6NHQ2 334 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 DIRC3C9JPN6 131 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 CA1P00915 261 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 IFNA7P01567 189 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 TSPOP30536 169 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 DEFB1P60022 68 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 TEX261Q6UWH6 196 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 TXNDC17Q9BRA2 123 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
NSMCE1-201ENST00000361439 K7EQM0 130 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 NMBP08949 121 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 GIG44P09565 113 aaPredicted RBP10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 TAGLN2P37802 199 aaKnown RBP10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 RNF183Q96D59 192 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 EPDR1Q9UM22 224 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 LENEPQ9Y5L5 61 aa10.12□□□□□ -0.79
NSMCE1-201ENST00000361439 AGRNO00468 2067 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 GGTLC3B5MD39 225 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 TCRAP04437 139 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 ZNF705DP0CH99 300 aaPredicted RBP10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 ZNF705BP0CI00 300 aaPredicted RBP10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 CDKN1BP46527 198 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 CCDC28AQ8IWP9 274 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 RCHY1Q96PM5 261 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 ASCL2Q99929 193 aa10.11□□□□□ -0.79
NSMCE1-201ENST00000361439 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms