RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 TMEM213A2RRL7 107 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 RELQ04864 619 aaPredicted RBP6.71□□□□□ -1.34
RFX3-202ENST00000358730 Q6ZVH6 145 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 RABAC1Q9UI14 185 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 RAXQ9Y2V3 346 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 ASH1LQ9NR48 2969 aaKnown RBP6.7□□□□□ -1.34
RFX3-202ENST00000358730 IGHV3-35A0A0C4DH35 117 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 MUC21A0A0G2JKD1 596 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 OOSP1A8MZH6 123 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 D6R8Y8 96 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 CACNA1BQ00975 2339 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 KLRB1Q12918 225 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 OR10AG1Q8NH19 301 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 IGHV7-81A0A0B4J1V7 117 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 LOC389332A0A1B0GUA5 103 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 TCF21O43680 179 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 CTSGP08311 255 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
RFX3-202ENST00000358730 MINOS1Q5TGZ0 78 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 IGFL4Q6B9Z1 124 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 SLC25A34Q6PIV7 304 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 AMN1Q8IY45 258 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 ORAOV1Q8WV07 137 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 MINOS1-NBL1R4GNA1 71 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 SVEP1Q4LDE5 3571 aa6.7□□□□□ -1.34
RFX3-202ENST00000358730 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
RFX3-202ENST00000358730 ECSCRQ19T08 205 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 SAPCD1Q5SSQ6 148 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 C1orf122Q6ZSJ8 110 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 PRR25Q96S07 402 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 COX11Q9Y6N1 276 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 EGR2P11161 476 aaPredicted RBP6.69□□□□□ -1.34
RFX3-202ENST00000358730 HLA-DMBP28068 263 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 GPR183P32249 361 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 EBI3Q14213 229 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 MPV17L2Q567V2 206 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 PRELID3AQ96N28 172 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 VGLL1Q99990 258 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 ZNF747Q9BV97 191 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 SCRT2Q9NQ03 307 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 NDUFS7O75251 213 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 FAM106CPP0CH98 169 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 UCNP55089 124 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 FAM106AQ4KMX7 169 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 ORMDL3Q8N138 153 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 Q8N9W7 124 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 ZNF738Q8NE65 137 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 SMAD5-AS1Q9Y6J3 95 aa6.69□□□□□ -1.34
RFX3-202ENST00000358730 LOXL1Q08397 574 aaPredicted RBP6.68□□□□□ -1.34
RFX3-202ENST00000358730 C15orf32Q32M92 178 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 DTX2Q86UW9 622 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 OR8A1Q8NGG7 326 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 NCR2O95944 276 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 ZNF80P51504 273 aaPredicted RBP6.68□□□□□ -1.34
RFX3-202ENST00000358730 PTTG1IPP53801 180 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 TWIST1Q15672 202 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
RFX3-202ENST00000358730 COX8CQ7Z4L0 72 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 FER1L6-AS1Q8NA97 138 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 SIRPDQ9H106 197 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 AKAP6Q13023 2319 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 HIVEP3Q5T1R4 2406 aa6.68□□□□□ -1.34
RFX3-202ENST00000358730 A0A096LNJ9 63 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 A0A1W2PPR1 153 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 FBLL1A6NHQ2 334 aaKnown RBP6.67□□□□□ -1.34
RFX3-202ENST00000358730 NUDT3O95989 172 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 BMI1P35226 326 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 ARL6IP6Q8N6S5 226 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 MS4A6AQ9H2W1 248 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 U3KQK5 164 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 ATP6V0E1O15342 81 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 IGHG4P01861 327 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 S100A7P31151 101 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
RFX3-202ENST00000358730 RHOGP84095 191 aa6.67□□□□□ -1.34
RFX3-202ENST00000358730 FAM110DQ8TAY7 271 aaPredicted RBP6.67□□□□□ -1.34
RFX3-202ENST00000358730 CCL25O15444 150 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 ORM1P02763 201 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 ZNF502Q8TBZ5 544 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 UBTD1Q9HAC8 227 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 IGHV3-66A0A0C4DH42 116 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 IGHV2-70DA0A0C4DH43 119 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 CKS2P33552 79 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 SAA4P35542 130 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 FXYD7P58549 80 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 BVES-AS1Q5T3Y7 98 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 A0A087X0K7 114 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 NPYP01303 97 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 CLEC3BP05452 202 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 IGLC6P0CF74 106 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 ERCC8Q13216 396 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms