RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NHLH1Q02575 133 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 C5orf64Q2M2E5 130 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 MRPL51Q4U2R6 128 aaKnown RBP13.87□□□□□ -0.19
RTN4-204ENST00000357732 OCIAD2Q56VL3 154 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 TTC9CQ8N5M4 171 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 OR8A1Q8NGG7 326 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 PRR25Q96S07 402 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 ONECUT1Q9UBC0 465 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 TIMM8BQ9Y5J9 83 aaPredicted RBP13.87□□□□□ -0.19
RTN4-204ENST00000357732 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.86□□□□□ -0.19
RTN4-204ENST00000357732 LINC01546A6NGU7 62 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 M0R1W7 72 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 C21orf62-AS1Q17RA5 79 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 ZNF562Q6V9R5 426 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 AMN1Q8IY45 258 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 OR4X2Q8NGF9 303 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 FANCD2OSQ96PS1 177 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 H3BRM9 83 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 HSD52Q0P140 79 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 CNFNQ9BYD5 112 aa13.86□□□□□ -0.19
RTN4-204ENST00000357732 TMEM213A2RRL7 107 aa13.85□□□□□ -0.19
RTN4-204ENST00000357732 IGLC6P0CF74 106 aa13.85□□□□□ -0.19
RTN4-204ENST00000357732 FER1L6-AS1Q8NA97 138 aa13.85□□□□□ -0.19
RTN4-204ENST00000357732 C21orf62Q9NYP8 219 aa13.85□□□□□ -0.19
RTN4-204ENST00000357732 RIF1Q5UIP0 2472 aaKnown RBP13.85□□□□□ -0.19
RTN4-204ENST00000357732 SMAD7O15105 426 aaKnown RBP13.85□□□□□ -0.19
RTN4-204ENST00000357732 GTF2H5Q6ZYL4 71 aa13.85□□□□□ -0.19
RTN4-204ENST00000357732 IFI27L1Q96BM0 104 aa13.85□□□□□ -0.19
RTN4-204ENST00000357732 ODF3BA8MYP8 253 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 K7ERU9 68 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 FAM106CPP0CH98 169 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 CKS2P33552 79 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 COTL1Q14019 142 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 FAM106AQ4KMX7 169 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 LDLRAD2Q5SZI1 272 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 CCDC144NLQ6NUI1 221 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 ARPC1AQ92747 370 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 VKORC1Q9BQB6 163 aa13.84□□□□□ -0.19
RTN4-204ENST00000357732 TRAV8-6A0A0B4J262 113 aa13.83□□□□□ -0.19
RTN4-204ENST00000357732 LOC389332A0A1B0GUA5 103 aa13.83□□□□□ -0.19
RTN4-204ENST00000357732 OOSP1A8MZH6 123 aa13.83□□□□□ -0.19
RTN4-204ENST00000357732 F8W735 103 aaPredicted RBP13.83□□□□□ -0.19
RTN4-204ENST00000357732 LOXL1Q08397 574 aaPredicted RBP13.83□□□□□ -0.19
RTN4-204ENST00000357732 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.19
RTN4-204ENST00000357732 RABAC1Q9UI14 185 aa13.83□□□□□ -0.19
RTN4-204ENST00000357732 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.19
RTN4-204ENST00000357732 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
RTN4-204ENST00000357732 A1L4Q6 167 aa13.83□□□□□ -0.2
RTN4-204ENST00000357732 CACNG7P62955 275 aa13.83□□□□□ -0.2
RTN4-204ENST00000357732 ACACAQ13085 2346 aa13.83□□□□□ -0.2
RTN4-204ENST00000357732 C9orf118A6NHY6 69 aa13.82□□□□□ -0.2
RTN4-204ENST00000357732 AP1S3Q96PC3 154 aa13.82□□□□□ -0.2
RTN4-204ENST00000357732 ZZEF1O43149 2961 aa13.82□□□□□ -0.2
RTN4-204ENST00000357732 EGR2P11161 476 aaPredicted RBP13.82□□□□□ -0.2
RTN4-204ENST00000357732 RAB9AP51151 201 aa13.82□□□□□ -0.2
RTN4-204ENST00000357732 ASCL2Q99929 193 aa13.82□□□□□ -0.2
RTN4-204ENST00000357732 PRTN3P24158 256 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 TWIST1Q15672 202 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 SMIM15Q7Z3B0 74 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 TIMD4Q96H15 378 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 MAP1LC3AQ9H492 121 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 GAGE10A6NGK3 116 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 HILPDAQ9Y5L2 63 aa13.81□□□□□ -0.2
RTN4-204ENST00000357732 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
RTN4-204ENST00000357732 TMSB15BA0A087X1C1 80 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 NPYP01303 97 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
RTN4-204ENST00000357732 FBXL19-AS1Q494R0 122 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 UFSP1Q6NVU6 142 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 C1orf122Q6ZSJ8 110 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 ERASQ7Z444 233 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 NXT2Q9NPJ8 142 aaKnown RBP13.8□□□□□ -0.2
RTN4-204ENST00000357732 APC2O95996 2303 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 RBAKDNA6NC62 111 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 KLF17Q5JT82 389 aaPredicted RBP13.8□□□□□ -0.2
RTN4-204ENST00000357732 ADAMTSL5Q6ZMM2 481 aa13.8□□□□□ -0.2
RTN4-204ENST00000357732 FABP5P3A8MUU1 101 aa13.79□□□□□ -0.2
RTN4-204ENST00000357732 NDUFS7O75251 213 aa13.79□□□□□ -0.2
RTN4-204ENST00000357732 EBI3Q14213 229 aa13.79□□□□□ -0.2
RTN4-204ENST00000357732 HES1Q14469 280 aa13.79□□□□□ -0.2
RTN4-204ENST00000357732 RNF151Q2KHN1 245 aa13.79□□□□□ -0.2
RTN4-204ENST00000357732 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
RTN4-204ENST00000357732 Q8N6K4 173 aa13.79□□□□□ -0.2
RTN4-204ENST00000357732 VPS25Q9BRG1 176 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 SNAI2O43623 268 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 CTSGP08311 255 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 PRB4P10163 310 aaPredicted RBP13.78□□□□□ -0.2
RTN4-204ENST00000357732 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
RTN4-204ENST00000357732 KLK9Q2XQG4 91 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 MINOS1Q5TGZ0 78 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 ZMAT4Q9H898 229 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 HIGD1BQ9P298 99 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 SMPXQ9UHP9 88 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 MINOS1-NBL1R4GNA1 71 aa13.78□□□□□ -0.2
RTN4-204ENST00000357732 FCER1GP30273 86 aa13.77□□□□□ -0.21
RTN4-204ENST00000357732 TACC2O95359 2948 aa13.77□□□□□ -0.21
RTN4-204ENST00000357732 K7EP34 96 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms