RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OTORQ9NRC9 128 aa18.83■□□□□ 0.6
SSBP3-202ENST00000357475 KNCNA6PVL3 124 aa18.82■□□□□ 0.6
SSBP3-202ENST00000357475 ZNF705DP0CH99 300 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-202ENST00000357475 ZNF705BP0CI00 300 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-202ENST00000357475 ATP5G3P48201 142 aa18.82■□□□□ 0.6
SSBP3-202ENST00000357475 A0A1W2PRE2 83 aa18.81■□□□□ 0.6
SSBP3-202ENST00000357475 SUMO1P63165 101 aaKnown RBP18.81■□□□□ 0.6
SSBP3-202ENST00000357475 GNG5P63218 68 aa18.81■□□□□ 0.6
SSBP3-202ENST00000357475 LYPD1Q8N2G4 141 aa18.81■□□□□ 0.6
SSBP3-202ENST00000357475 HAGHQ16775 308 aa18.8■□□□□ 0.6
SSBP3-202ENST00000357475 CST9LP1Q5W188 147 aa18.8■□□□□ 0.6
SSBP3-202ENST00000357475 RPUSD4Q96CM3 377 aaKnown RBP18.8■□□□□ 0.6
SSBP3-202ENST00000357475 AURKAIP1Q9NWT8 199 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-202ENST00000357475 RPH3ALQ9UNE2 315 aa18.79■□□□□ 0.6
SSBP3-202ENST00000357475 RGS13O14921 159 aa18.79■□□□□ 0.6
SSBP3-202ENST00000357475 RARRES2Q99969 163 aa18.79■□□□□ 0.6
SSBP3-202ENST00000357475 FAM110AQ9BQ89 295 aa18.79■□□□□ 0.6
SSBP3-202ENST00000357475 ZMAT5Q9UDW3 170 aaKnown RBP18.79■□□□□ 0.6
SSBP3-202ENST00000357475 SLC25A5P05141 298 aaKnown RBP18.78■□□□□ 0.6
SSBP3-202ENST00000357475 ACTL10Q5JWF8 245 aa18.78■□□□□ 0.6
SSBP3-202ENST00000357475 IGKV2-40A0A087WW87 121 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-202ENST00000357475 IGKV2D-40P01614 121 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-202ENST00000357475 CLLU1Q5K131 121 aa18.77■□□□□ 0.6
SSBP3-202ENST00000357475 CCDC28AQ8IWP9 274 aa18.77■□□□□ 0.6
SSBP3-202ENST00000357475 SAV1Q9H4B6 383 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-202ENST00000357475 MANBALQ9NQG1 85 aa18.77■□□□□ 0.6
SSBP3-202ENST00000357475 PRELID1Q9Y255 219 aa18.77■□□□□ 0.6
SSBP3-202ENST00000357475 PPT1P50897 306 aa18.76■□□□□ 0.59
SSBP3-202ENST00000357475 RAB14P61106 215 aa18.76■□□□□ 0.59
SSBP3-202ENST00000357475 MRPL53Q96EL3 112 aaKnown RBP18.76■□□□□ 0.59
SSBP3-202ENST00000357475 CLEC5AQ9NY25 188 aa18.76■□□□□ 0.59
SSBP3-202ENST00000357475 DIRC3C9JPN6 131 aa18.75■□□□□ 0.59
SSBP3-202ENST00000357475 BCL2P10415 239 aa18.75■□□□□ 0.59
SSBP3-202ENST00000357475 CMC4P56277 68 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-202ENST00000357475 PMS2P11Q13670 270 aa18.75■□□□□ 0.59
SSBP3-202ENST00000357475 ARL2-SNX15V9GYD0 113 aa18.75■□□□□ 0.59
SSBP3-202ENST00000357475 A0A0J9YX75 114 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 LOC102723971A0A1B0GUV8 181 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 K7EIL1 84 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 ERCC8Q13216 396 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 FOXI2Q6ZQN5 318 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 C5orf17Q8NAS9 161 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 OR8A1Q8NGG7 326 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 CMTM2Q8TAZ6 248 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 SRD5A3Q9H8P0 318 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 C11orf94C9JXX5 98 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 IGKV3-20P01619 116 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 HIST1H1AQ02539 215 aaPredicted RBP18.74■□□□□ 0.59
SSBP3-202ENST00000357475 VGLL1Q99990 258 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 EPDR1Q9UM22 224 aa18.74■□□□□ 0.59
SSBP3-202ENST00000357475 RBMY1BA6NDE4 496 aaKnown RBP18.73■□□□□ 0.59
SSBP3-202ENST00000357475 RBMY1EA6NEQ0 496 aaKnown RBP18.73■□□□□ 0.59
SSBP3-202ENST00000357475 IFNA1P01562 189 aa18.73■□□□□ 0.59
SSBP3-202ENST00000357475 RBMY1DP0C7P1 496 aaKnown RBP18.73■□□□□ 0.59
SSBP3-202ENST00000357475 IGHV4-30-4P0DP06 118 aa18.73■□□□□ 0.59
SSBP3-202ENST00000357475 TOR2AQ5JU69 321 aa18.73■□□□□ 0.59
SSBP3-202ENST00000357475 GOLT1AQ6ZVE7 132 aa18.73■□□□□ 0.59
SSBP3-202ENST00000357475 ASCL2Q99929 193 aa18.73■□□□□ 0.59
SSBP3-202ENST00000357475 RBFOX3A6NFN3 312 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 H3BMM0 161 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 TCRAP04437 139 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 HLA-DRB4P13762 266 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 CNN1P51911 297 aaKnown RBP18.72■□□□□ 0.59
SSBP3-202ENST00000357475 RXFP4Q8TDU9 374 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 SGK494Q96LW2 274 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 FAM210AQ96ND0 272 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 HLA-DRB4X5D2U9 266 aa18.72■□□□□ 0.59
SSBP3-202ENST00000357475 SCO2A0A1W2PP80 73 aa18.71■□□□□ 0.59
SSBP3-202ENST00000357475 CSN1S1P47710 185 aa18.71■□□□□ 0.59
SSBP3-202ENST00000357475 EBLN2Q6P2I7 272 aa18.71■□□□□ 0.59
SSBP3-202ENST00000357475 LINC00479Q96M42 142 aa18.71■□□□□ 0.59
SSBP3-202ENST00000357475 NKX6-2Q9C056 277 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-202ENST00000357475 VAX2Q9UIW0 290 aa18.71■□□□□ 0.59
SSBP3-202ENST00000357475 TRAV8-1A0A0A6YYK1 113 aa18.7■□□□□ 0.58
SSBP3-202ENST00000357475 RPL35AP18077 110 aaKnown RBP18.7■□□□□ 0.58
SSBP3-202ENST00000357475 SRSF3P84103 164 aaKnown RBP18.7■□□□□ 0.58
SSBP3-202ENST00000357475 MEF2BQ02080 365 aaPredicted RBP18.7■□□□□ 0.58
SSBP3-202ENST00000357475 ZNF506Q5JVG8 444 aa18.7■□□□□ 0.58
SSBP3-202ENST00000357475 OR4B1Q8NGF8 309 aa18.7■□□□□ 0.58
SSBP3-202ENST00000357475 PEX7O00628 323 aa18.69■□□□□ 0.58
SSBP3-202ENST00000357475 TRPT1Q86TN4 253 aaKnown RBP18.69■□□□□ 0.58
SSBP3-202ENST00000357475 STHQ8IWL8 128 aa18.69■□□□□ 0.58
SSBP3-202ENST00000357475 AGPAT4-IT1Q9H0P7 198 aa18.69■□□□□ 0.58
SSBP3-202ENST00000357475 OR10J6PQ8NGY7 276 aa18.69■□□□□ 0.58
SSBP3-202ENST00000357475 TRAV34A0A0B4J273 112 aa18.68■□□□□ 0.58
SSBP3-202ENST00000357475 NPIPB6E9PJ23 425 aa18.68■□□□□ 0.58
SSBP3-202ENST00000357475 Q8TAT8 98 aa18.68■□□□□ 0.58
SSBP3-202ENST00000357475 ATG101Q9BSB4 218 aa18.68■□□□□ 0.58
SSBP3-202ENST00000357475 EIF5A2Q9GZV4 153 aaKnown RBP18.68■□□□□ 0.58
SSBP3-202ENST00000357475 MEGF8Q7Z7M0 2845 aa18.67■□□□□ 0.58
SSBP3-202ENST00000357475 AMTNQ6UX39 209 aa18.67■□□□□ 0.58
SSBP3-202ENST00000357475 TUBA4BQ9H853 241 aa18.67■□□□□ 0.58
SSBP3-202ENST00000357475 IGLV2-11P01706 119 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 CT45A10P0DMU9 189 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 FXYD7P58549 80 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 C9orf47Q6ZRZ4 202 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 ARL6IP6Q8N6S5 226 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 CYB561D1Q8N8Q1 229 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 SLC35B3Q9H1N7 401 aa18.66■□□□□ 0.58
SSBP3-202ENST00000357475 A8MTW9 85 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms