RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GATA3P23771 443 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 C16orf47Q6ZP98 133 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-202ENST00000357162 HILPDAQ9Y5L2 63 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 H3BT86 120 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 IGFBP6P24592 240 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-202ENST00000357162 Q6ZWC4 215 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 VWC2LB2RUY7 222 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 TRPT1Q86TN4 253 aaKnown RBP5.38□□□□□ -1.55
VPS13B-202ENST00000357162 CEND1Q8N111 149 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 JMJD8Q96S16 334 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 A0A1W2PR77 199 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 LINC00311Q8N616 119 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 IGHV1-69DA0A0B4J2H0 117 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 C17orf100A8MU93 164 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 F8WEM9 126 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 ANKRD29Q8N6D5 301 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 C5orf64Q2M2E5 130 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 COLCA1Q6ZS62 124 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 ZNF329Q86UD4 541 aa5.38□□□□□ -1.55
VPS13B-202ENST00000357162 NTN3O00634 580 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-202ENST00000357162 IGHV3OR15-7A0A075B7D8 119 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 PRR19A6NJB7 356 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 C1QCP02747 245 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 TRGV3P03979 118 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 STPG4Q8N801 248 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 TRBV6-1A0A0K0K1D8 114 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 RPL36AP83881 106 aaKnown RBP5.37□□□□□ -1.55
VPS13B-202ENST00000357162 RPL36ALQ969Q0 106 aaKnown RBP5.37□□□□□ -1.55
VPS13B-202ENST00000357162 PPP1R32Q7Z5V6 425 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 INS-IGF2F8WCM5 200 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 LPAL2Q16609 132 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 GFRA1P56159 465 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 SIGLEC15Q6ZMC9 328 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 RPL15P61313 204 aaKnown RBP5.37□□□□□ -1.55
VPS13B-202ENST00000357162 IGHV3-7P01780 117 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 EVI2AP22794 236 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 ALKBH6Q3KRA9 238 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 SMIM2Q9BVW6 85 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 FBXL15Q9H469 300 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 V9GYV3 84 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 PF4P02776 101 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 TFPI2P48307 235 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 VOPP1Q96AW1 172 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 PAX8Q06710 450 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 PSG7Q13046 419 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 ZNF114Q8NC26 417 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 FLVCR1-AS1Q8TAF5 88 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 JPT2Q9H910 190 aa5.37□□□□□ -1.55
VPS13B-202ENST00000357162 CD7P09564 240 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 ST6GALNAC6Q969X2 333 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 FOXF2Q12947 444 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 MRPL23Q16540 153 aaKnown RBP5.36□□□□□ -1.55
VPS13B-202ENST00000357162 ZNF826PQ6ZT77 177 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 SPACA3Q8IXA5 215 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 INSP01308 110 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 A0A0A6YYD4 124 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 CELA2BP08218 269 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-202ENST00000357162 ZNRF1Q8ND25 227 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 LTAP01374 205 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 H3BUA1 57 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 NPYP01303 97 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 TMEM155Q4W5P6 130 aa5.36□□□□□ -1.55
VPS13B-202ENST00000357162 A6NNC1 897 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 MAJINQ3KP22 176 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 LYZL1Q6UWQ5 148 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 C1orf147Q96MC9 270 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-202ENST00000357162 Q6P435 159 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 CARD19Q96LW7 228 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 H0YJW9 148 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 IGHV4-39P01824 125 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 C1orf122Q6ZSJ8 110 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 PRADC1Q9BSG0 188 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 DAZ1Q9NQZ3 744 aaKnown RBP5.35□□□□□ -1.55
VPS13B-202ENST00000357162 IGKV1D-8A0A087WSZ0 117 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 HERVK_113P63121 156 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 LYZL4Q96KX0 146 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 TRBV19A0A075B6N1 114 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 PAX9P55771 341 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 PLA2G2FQ9BZM2 168 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 RNASE2P10153 161 aaKnown RBP5.35□□□□□ -1.55
VPS13B-202ENST00000357162 LTBRP36941 435 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 LCN12Q6JVE5 192 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 THAP8Q8NA92 274 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 DUX5Q96PT3 197 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 HS3ST6Q96QI5 342 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 FOXI2Q6ZQN5 318 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 RNASE4P34096 147 aaKnown RBP5.35□□□□□ -1.55
VPS13B-202ENST00000357162 HERV-K104P63124 156 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 ERCC8Q13216 396 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 C15orf32Q32M92 178 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 VSIG2Q96IQ7 327 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 SCRT1Q9BWW7 348 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 CCL21O00585 134 aa5.35□□□□□ -1.55
VPS13B-202ENST00000357162 SLC25A45Q8N413 288 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 DUX3Q96PT4 197 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 C9JAW5 83 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 K7EM74 188 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 CCL4P13236 92 aa5.34□□□□□ -1.55
VPS13B-202ENST00000357162 CCL3L1P16619 93 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms