RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 VOPP1Q96AW1 172 aa5.59□□□□□ -1.51
NF1-201ENST00000356175 PAX4O43316 350 aa5.59□□□□□ -1.51
NF1-201ENST00000356175 DLL3Q9NYJ7 618 aa5.59□□□□□ -1.51
NF1-201ENST00000356175 C21orf140B9A014 251 aa5.59□□□□□ -1.51
NF1-201ENST00000356175 NDUFS7O75251 213 aa5.59□□□□□ -1.51
NF1-201ENST00000356175 PDLIM4P50479 330 aa5.59□□□□□ -1.51
NF1-201ENST00000356175 TEN1Q86WV5 123 aa5.59□□□□□ -1.52
NF1-201ENST00000356175 THAP10Q9P2Z0 257 aaPredicted RBP5.59□□□□□ -1.52
NF1-201ENST00000356175 USP9XQ93008 2570 aaPredicted RBP5.59□□□□□ -1.52
NF1-201ENST00000356175 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.52
NF1-201ENST00000356175 FAM110CQ1W6H9 321 aa5.59□□□□□ -1.52
NF1-201ENST00000356175 LINC00205P59089 165 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 SPANXA1Q9NS26 97 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 IGLV3-16A0A075B6K0 115 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 IGKV1-8A0A0C4DH67 115 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 J3QRE1 110 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 ZNF329Q86UD4 541 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 ID3Q02535 119 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 COA6Q5JTJ3 125 aaKnown RBP5.58□□□□□ -1.52
NF1-201ENST00000356175 LINC01590Q5TEZ4 76 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 WFDC9Q8NEX5 89 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 TRBV19A0A075B6N1 114 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 FAM90A26D6RGX4 464 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 PMS2CLQ68D20 193 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 DSCR8Q96T75 97 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 CCL13Q99616 98 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 FGF12P61328 243 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 PEMTQ9UBM1 199 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 BPTFQ12830 3046 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 DUSP15Q9H1R2 295 aaPredicted RBP5.58□□□□□ -1.52
NF1-201ENST00000356175 TRAV3A0A0B4J244 114 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 MRPL51Q4U2R6 128 aaKnown RBP5.58□□□□□ -1.52
NF1-201ENST00000356175 GCSAMQ8N6F7 178 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 JPT1Q9UK76 154 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 NOTCH2Q04721 2471 aa5.58□□□□□ -1.52
NF1-201ENST00000356175 A0A087WWL8 130 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 IGLV3-27P01718 113 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 MRPS17Q9Y2R5 130 aaKnown RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 LEPROTO15243 131 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 ZNF658BQ4V348 819 aaPredicted RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 MRPL35Q9NZE8 188 aaKnown RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 CHD8Q9HCK8 2581 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 UTF1Q5T230 341 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 Q6ZR03 302 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 IFI27L2Q9H2X8 130 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 FAM19A5Q7Z5A7 132 aaPredicted RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 TNFAIP6P98066 277 aaPredicted RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 FAM168AQ92567 244 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 LIME1Q9H400 295 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 NDUFB3O43676 98 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 DAND5Q8N907 189 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 J3QT63 122 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 FOXG1P55316 489 aaPredicted RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 OTORQ9NRC9 128 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 CISD3P0C7P0 127 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 SLC25A48Q6ZT89 311 aaKnown RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 PAQR4Q8N4S7 273 aaPredicted RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 C14orf178Q8N769 122 aaPredicted RBP5.57□□□□□ -1.52
NF1-201ENST00000356175 V9GYV3 84 aa5.57□□□□□ -1.52
NF1-201ENST00000356175 C5orf63A6NC05 138 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 TNFRSF18Q9Y5U5 241 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 CCL11P51671 97 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 SLC25A39Q9BZJ4 359 aaPredicted RBP5.56□□□□□ -1.52
NF1-201ENST00000356175 FAM90A10PA6NDY2 464 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 FAM90A8PA6NJQ4 464 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 FAM90A24PP0C7X0 464 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 ZIC1Q15915 447 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 CSRP2Q16527 193 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 FAM90A22PA8MWA6 464 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 FAM90A12PA8MX19 464 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 FAM90A23PA8MXZ1 464 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 ZNF146Q15072 292 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 MORN3Q6PF18 240 aaPredicted RBP5.56□□□□□ -1.52
NF1-201ENST00000356175 RPS19BP1Q86WX3 136 aaKnown RBP5.56□□□□□ -1.52
NF1-201ENST00000356175 C9orf40Q8IXQ3 194 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 CELA2AP08217 269 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 MBD3L2Q8NHZ7 208 aaPredicted RBP5.56□□□□□ -1.52
NF1-201ENST00000356175 ATOX1O00244 68 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 IGFBP3P17936 291 aaPredicted RBP5.56□□□□□ -1.52
NF1-201ENST00000356175 PEBP1P30086 187 aaKnown RBP5.56□□□□□ -1.52
NF1-201ENST00000356175 EFNA4P52798 201 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 A0A1W2PRX2 142 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 LRCOL1A6NCL2 159 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 IGKV1D-43A0A0B4J1Z2 117 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 HLA-DMBP28068 263 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 SPEM2Q0P670 501 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 TMEM52BQ4KMG9 183 aa5.56□□□□□ -1.52
NF1-201ENST00000356175 H0YJW9 148 aa5.55□□□□□ -1.52
NF1-201ENST00000356175 RNF115Q9Y4L5 304 aa5.55□□□□□ -1.52
NF1-201ENST00000356175 HAX1O00165 279 aa5.55□□□□□ -1.52
NF1-201ENST00000356175 NTF4P34130 210 aa5.55□□□□□ -1.52
NF1-201ENST00000356175 BAALCQ8WXS3 180 aa5.55□□□□□ -1.52
NF1-201ENST00000356175 BAALC-AS2P0C853 105 aa5.55□□□□□ -1.52
NF1-201ENST00000356175 CECR9P0C854 216 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms