RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 Q56UQ5 140 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 TCTEX1D4Q5JR98 221 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 PATE2Q6UY27 113 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 BPIFA4PQ86YQ2 179 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF491Q8N8L2 437 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 OR5AU1Q8NGC0 362 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 OR1B1Q8NGR6 318 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 MYOZ3Q8TDC0 251 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 RXFP4Q8TDU9 374 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 HIST1H2BAQ96A08 127 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 TVP23CQ96ET8 276 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 ASCL2Q99929 193 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 RARRES2Q99969 163 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 PAXXQ9BUH6 204 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 SLC25A39Q9BZJ4 359 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-201ENST00000355766 OR51M1Q9H341 326 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 CLEC5AQ9NY25 188 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 ZMAT5Q9UDW3 170 aaKnown RBP5.3□□□□□ -1.56
VPS13A-201ENST00000355766 NAT8Q9UHE5 227 aa5.3□□□□□ -1.56
VPS13A-201ENST00000355766 TSSC4Q9Y5U2 329 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-201ENST00000355766 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.29□□□□□ -1.56
VPS13A-201ENST00000355766 A0A1B0GV50 99 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 SERTM2A0A1B0GWG4 89 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 H3BQ15 152 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 IL4P05112 153 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 HIST1H1EP10412 219 aaKnown RBP5.29□□□□□ -1.56
VPS13A-201ENST00000355766 GATA2P23769 480 aaPredicted RBP5.29□□□□□ -1.56
VPS13A-201ENST00000355766 PSMB8P28062 276 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 MYCNOSP40205 109 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 LYZP61626 148 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 GUCA2BQ16661 112 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 TIGITQ495A1 244 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 SAMD13Q5VXD3 122 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF343Q6P1L6 599 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 C19orf35Q6ZS72 473 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 IQCF2Q8IXL9 164 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 OR5T1Q8NG75 326 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 FXYD5Q96DB9 178 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 RCHY1Q96PM5 261 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 SMIM7Q9BQ49 75 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 MCRIP2Q9BUT9 160 aaKnown RBP5.29□□□□□ -1.56
VPS13A-201ENST00000355766 CTDSP1Q9GZU7 261 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 SMCO4Q9NRQ5 59 aa5.29□□□□□ -1.56
VPS13A-201ENST00000355766 A0A087X0K7 114 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 ZNF727A8MUV8 499 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 G3V318 75 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 NDUFA4O00483 81 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 TSPAN4O14817 238 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 PPP1R2P9O14990 202 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 TRGV3P03979 118 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 IGLC2P0DOY2 106 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 ORM2P19652 201 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 BMI1P35226 326 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 TPPP2P59282 170 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 KHDC1LQ5JSQ8 128 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 SPATA31B1PQ5VZV4 182 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 CST9LP1Q5W188 147 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 ZFAND6Q6FIF0 208 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 TEX38Q6PEX7 206 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 ADAMTSL5Q6ZMM2 481 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 C5orf17Q8NAS9 161 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 BTF3L4Q96K17 158 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 PARLQ9H300 379 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 RABAC1Q9UI14 185 aa5.28□□□□□ -1.56
VPS13A-201ENST00000355766 YTHDF2Q9Y5A9 579 aaKnown RBP5.28□□□□□ -1.56
VPS13A-201ENST00000355766 RYR1P21817 5038 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 TRBV6-1A0A0K0K1D8 114 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 OR2T8A6NH00 312 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF98A6NK75 572 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 GGTLC3B5MD39 225 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 MRPS12O15235 138 aaKnown RBP5.27□□□□□ -1.57
VPS13A-201ENST00000355766 IGHV3-48P01763 117 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 MT-ND4LP03901 98 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 CLEC3BP05452 202 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 NBEAP1P0C6P0 100 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 GPR183P32249 361 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 TAS2R60P59551 318 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 BLCAPP62952 87 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 PSG9Q00887 426 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 USF2Q15853 346 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-201ENST00000355766 TMEM241Q24JQ0 296 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 C2CD4CQ8TF44 421 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 UBE2E2Q96LR5 201 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 PRR25Q96S07 402 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 METTL26Q96S19 204 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 IMMP2LQ96T52 175 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 ATG101Q9BSB4 218 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 ELOVL1Q9BW60 279 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 SDF2L1Q9HCN8 221 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 BIN3Q9NQY0 253 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 OTORQ9NRC9 128 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 KLF12Q9Y4X4 402 aa5.27□□□□□ -1.57
VPS13A-201ENST00000355766 PUS1Q9Y606 427 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS13A-201ENST00000355766 ALMS1Q8TCU4 4167 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 TRBV19A0A075B6N1 114 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 IGHV3-21A0A0B4J1V1 117 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 A0A1W2PS18 150 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms