RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 PGPEP1LA6NFU8 196 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 B4DEV8 164 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 CSN1S1P47710 185 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 GNG4P50150 75 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 UBE2G1P62253 170 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 RPL11P62913 178 aaKnown RBP10.34□□□□□ -0.75
HOXA1-202ENST00000355633 LINC01551Q86U37 167 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 RAX2Q96IS3 184 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 NF1P21359 2839 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 C2orf70A6NJV1 201 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 ISLRO14498 428 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 CBLN1P23435 193 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 TMEM183BQ1AE95 376 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 IGFL4Q6B9Z1 124 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 TCF24Q7RTU0 167 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
HOXA1-202ENST00000355633 DIRC3C9JPN6 131 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 CCL24O00175 119 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 FHL3Q13643 280 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 OR9G4Q8NGQ1 327 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 OCC1Q8TAD7 63 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
HOXA1-202ENST00000355633 FMC1Q96HJ9 113 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 IGF2BP2-AS1Q96M15 143 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
HOXA1-202ENST00000355633 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
HOXA1-202ENST00000355633 K7EQM0 130 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 M0QZ24 198 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 FOLR2P14207 255 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
HOXA1-202ENST00000355633 C16orf92Q96LL3 132 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 NRN1Q9NPD7 142 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
HOXA1-202ENST00000355633 IGKV3-7A0A075B6H7 116 aa10.32□□□□□ -0.76
HOXA1-202ENST00000355633 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
HOXA1-202ENST00000355633 KRTAP10-3P60369 221 aa10.32□□□□□ -0.76
HOXA1-202ENST00000355633 TMEM88Q6PEY1 159 aa10.32□□□□□ -0.76
HOXA1-202ENST00000355633 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
HOXA1-202ENST00000355633 RNF182Q8N6D2 247 aa10.32□□□□□ -0.76
HOXA1-202ENST00000355633 A0A087WWC5 75 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 PRB4P10163 310 aaPredicted RBP10.31□□□□□ -0.76
HOXA1-202ENST00000355633 FOXL1Q12952 345 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 CBLN2Q8IUK8 224 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 TMEM75Q8N9X5 138 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 ISOC2Q96AB3 205 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 CLEC5AQ9NY25 188 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 K7EN84 100 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 RNF212Q495C1 297 aa10.31□□□□□ -0.76
HOXA1-202ENST00000355633 MRPL53Q96EL3 112 aaKnown RBP10.31□□□□□ -0.76
HOXA1-202ENST00000355633 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 ZNF705FA8MVS1 300 aaPredicted RBP10.3□□□□□ -0.76
HOXA1-202ENST00000355633 SOCS3O14543 225 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 IGLV2-11P01706 119 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 MT-ND4LP03901 98 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 PSG3Q16557 428 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 ADAMTSL5Q6ZMM2 481 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 NDUFA11Q86Y39 141 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 SMCO4Q9NRQ5 59 aa10.3□□□□□ -0.76
HOXA1-202ENST00000355633 IGKV2-40A0A087WW87 121 aaPredicted RBP10.29□□□□□ -0.76
HOXA1-202ENST00000355633 LTAP01374 205 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 IGKV2D-40P01614 121 aaPredicted RBP10.29□□□□□ -0.76
HOXA1-202ENST00000355633 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
HOXA1-202ENST00000355633 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 Q86TA4 180 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 GBGT1Q8N5D6 347 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 NHLRC2Q8NBF2 726 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 CSN3P07498 182 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 CTDSP1Q9GZU7 261 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 PSG8Q9UQ74 426 aa10.29□□□□□ -0.76
HOXA1-202ENST00000355633 C2CD3Q4AC94 2353 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 GCGP01275 180 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 OR5I1Q13606 314 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 ANAPC16Q96DE5 110 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 SFRP2Q96HF1 295 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
HOXA1-202ENST00000355633 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 OVOL1O14753 267 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 WFDC3Q8IUB2 231 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 ZNF738Q8NE65 137 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 DYNLRB2Q8TF09 96 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 C20orf173Q96LM9 149 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
HOXA1-202ENST00000355633 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms