RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SIGLEC9Q9Y336 463 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 A0A0B4J2C4 111 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 FOXE3Q13461 319 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 AMTNQ6UX39 209 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 LOC285556D6RIA3 1793 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 A0A0G2JK05 382 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 NREPQ16612 68 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 FAM216BQ8N7L0 139 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 C15orf32Q32M92 178 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 LINC00312Q9Y6C7 94 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 PIN1P1O15428 100 aa6.59□□□□□ -1.36
SCN8A-201ENST00000354534 CCL3L1P16619 93 aa6.59□□□□□ -1.36
SCN8A-201ENST00000354534 PPP1R32Q7Z5V6 425 aa6.59□□□□□ -1.36
SCN8A-201ENST00000354534 TM2D1Q9BX74 207 aa6.59□□□□□ -1.36
SCN8A-201ENST00000354534 TMEM133Q9H2Q1 129 aa6.59□□□□□ -1.36
SCN8A-201ENST00000354534 DKK4Q9UBT3 224 aa6.59□□□□□ -1.36
SCN8A-201ENST00000354534 IGHV1-24A0A0C4DH33 117 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 FAM240AA0A1B0GVK7 77 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 DKK1O94907 266 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 IGFBP3P17936 291 aaPredicted RBP6.58□□□□□ -1.36
SCN8A-201ENST00000354534 VSIG2Q96IQ7 327 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 CACNA1AO00555 2505 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 NYNRINQ9P2P1 1898 aaKnown RBP6.58□□□□□ -1.36
SCN8A-201ENST00000354534 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
SCN8A-201ENST00000354534 MORN2Q502X0 79 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 TMEM219Q86XT9 240 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 IL17RELQ6ZVW7 336 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 LTBP4Q8N2S1 1624 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 ZNF329Q86UD4 541 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 GLRX5Q86SX6 157 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 ZFP2Q6ZN57 461 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 TMEM52Q8NDY8 209 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 SLX1AQ9BQ83 275 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 METRNQ9UJH8 293 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 HIGD2BQ4VC39 106 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 COX7B2Q8TF08 81 aa6.58□□□□□ -1.36
SCN8A-201ENST00000354534 C1QCP02747 245 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 IGHV3-38A0A0C4DH36 116 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 STPG1Q5TH74 334 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 IGFL4Q6B9Z1 124 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 H0Y9J4 135 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 YPEL1O60688 119 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV1-5P01602 117 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 GNLYP22749 145 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 LYPD6Q86Y78 171 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 YPEL2Q96QA6 119 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 AGMATQ9BSE5 352 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 SBF2Q86WG5 1849 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 TRBV7-1A0A0A6YYK4 115 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 ANGP03950 147 aaKnown RBP6.57□□□□□ -1.36
SCN8A-201ENST00000354534 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 WFDC1Q9HC57 220 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 TFF1P04155 84 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 RETNQ9HD89 108 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 SBF1O95248 1867 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 DENND4AQ7Z401 1863 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 PTPN13Q12923 2485 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 SCN10AQ9Y5Y9 1956 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 COX8AP10176 69 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 RNASE13Q5GAN3 156 aaKnown RBP6.57□□□□□ -1.36
SCN8A-201ENST00000354534 SH2D6Q7Z4S9 175 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 FOXS1O43638 330 aa6.57□□□□□ -1.36
SCN8A-201ENST00000354534 LCTP09848 1927 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 KLHL30-AS1Q8NEE0 82 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 BUB3O43684 328 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 MPZP25189 248 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 PCDH15Q96QU1 1955 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 ARMS2P0C7Q2 107 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 ACACBO00763 2458 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 Q6ZT83 130 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 A0A096LPF7 62 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 ETV2O00321 342 aaPredicted RBP6.56□□□□□ -1.36
SCN8A-201ENST00000354534 PSG7Q13046 419 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 MALRD1Q5VYJ5 2156 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 TRBV19A0A075B6N1 114 aa6.56□□□□□ -1.36
SCN8A-201ENST00000354534 ETDCA0A1B0GVM5 59 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 FAM27E3Q08E93 113 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 CCL25O15444 150 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 VWC2Q2TAL6 325 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 TRAV3A0A0B4J244 114 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 ZNF497Q6ZNH5 498 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 MED13Q9UHV7 2174 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 TRAV26-2A0A0B4J265 109 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 A0A1B0GW64 132 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 TRAV1-1A0A0B4J248 108 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 NPYP01303 97 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 PLXND1Q9Y4D7 1925 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 A0A1B0GUS0 222 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 HERV-K104P63124 156 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms